Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4122 |
Symbol | rnc |
ID | 3521712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4337947 |
End bp | 4338747 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286565 |
Product | ribonuclease III |
Protein accession | YP_270777 |
Protein GI | 71281241 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTA ACCCTCACAA TCTTGCTAGA TTAACCAAAA AGCTTGGTTA TGAATTTAAT GAACCATTAT TATTGGTGCA AGCACTTACA CATCGAAGTG CCAAGGGCGC TCATAATGAA AGACTAGAGT TCCTCGGGGA CTCTATTTTA GGTTTTGTTA TTGCTGAAGC GCTTTATGAT AAATTTCCAA AGCATGACGA AGGCGATCTT ACTCGCATGC GTTCTAGCCT AGTTAAAGGG GTAACGTTAG CTGAAGTTGC ACGAGACTTT AACTTGGGTG AGTGCTTAAT ATTAGGGCCA GGTGAATTAA AAAGTGGCGG TCATCATCGT GAATCTATAT TAGAAGATGC GATTGAAGCC ATTATTGGTG CTGTATATTT AGATTCAAAT ATCGAGTGTT GTAAAGCACT TATCTTAAGT TGGTTTGAAA GACGCTTGAT GGTGATTAAA CCGGGTAATG AACAAAAAGA CCCTAAAACT CGCCTGCAAG AATTTTTACA AGGAAGAAAG ATCCCTCTTC CTACTTACGA AGTAATTGAT ACAACGGGAC AATCACATAA CCAAGAATTT ACCGTTCGTT GCCAAACGTC AGTGATCAGT GAAGTAGTTA TCGCTAAAGG AACAAGTCGT CGAAAAGCAG AGCAAGAAGC TGCGCAGCAG ATACTTGCTT TAATTGAAAA AGAAAGAGAA CAAGAAAAAG AAGTAAAAAT AAAACCAACA AAACAAGCTA AATTAGCAAA TCCCCGACAT ACTAAAAGTA ACCCAAGCAG CTCAAGCAAA AAAAGCAGCA CGAGAAAATA A
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Protein sequence | MKINPHNLAR LTKKLGYEFN EPLLLVQALT HRSAKGAHNE RLEFLGDSIL GFVIAEALYD KFPKHDEGDL TRMRSSLVKG VTLAEVARDF NLGECLILGP GELKSGGHHR ESILEDAIEA IIGAVYLDSN IECCKALILS WFERRLMVIK PGNEQKDPKT RLQEFLQGRK IPLPTYEVID TTGQSHNQEF TVRCQTSVIS EVVIAKGTSR RKAEQEAAQQ ILALIEKERE QEKEVKIKPT KQAKLANPRH TKSNPSSSSK KSSTRK
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