Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4102 |
Symbol | |
ID | 3521155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4318072 |
End bp | 4318845 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637286545 |
Product | hypothetical protein |
Protein accession | YP_270757 |
Protein GI | 71280686 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.177147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTACTTG TTGTTTCACC TGCGAAAAAA TTAGATTTTG AATCTCCTCT GGCTACAGAA AAATTTAGTC AACCTGGCTT GCTTGAGCAA AGCCAATTAT TAATAGATGA CTGCATTAAA CTTTCACCAA GTGAAATCGC AAGCTTGATG AAACTCAGTG ATAAACTTGC TGGTTTAAAT GCTGCACGTT TTGGGCAATG GTCAACACCT TTTACTCAAG ATAACGCAAG ACAAGCTATA TTGAGCTTTA ATGGTGATGT TTACACTGGA CTTGATGCGC AATCTTTTAG TGATGAAGAT TTTGAATTTG CACAGAAAAA TTTCAGAATC CTGTCAGGTT TATATGGTTT ATTAAAGCCC CTTGATTTAA TGCAAGCCTA CCGTTTAGAA ATGGGCTGTA AGCTTGGTAA CAGTCGAGGT GATAATTTAT ACCAGTTTTG GGGCGAGATT ATTACCGATG AACTGAATAA AACCTTGAGT GAGCTAGATG ATGATGTGCT TATTAACCTT GCCTCAACCG AATACTTTAA ATCAGTAAAG AAAAAATCGT TAAACGCTAC AATTATTACA CCAACCTTTA AAGATTGGAA AAACGGTCAA TATAAGATAA TCAGTTTTTT TGCTAAAAAA GCACGCGGAC TGATGGCGCG TTACATCATT CAGAATAAGC TAACATCCGT AGAGCAAATC AAAACATTTG ATTTAGCGGG TTATCAATAT AACGAAGCTA TGTCTAAAGA CAATGATTGG GTTTTTACTC GTAAAGAAAG CTAA
|
Protein sequence | MLLVVSPAKK LDFESPLATE KFSQPGLLEQ SQLLIDDCIK LSPSEIASLM KLSDKLAGLN AARFGQWSTP FTQDNARQAI LSFNGDVYTG LDAQSFSDED FEFAQKNFRI LSGLYGLLKP LDLMQAYRLE MGCKLGNSRG DNLYQFWGEI ITDELNKTLS ELDDDVLINL ASTEYFKSVK KKSLNATIIT PTFKDWKNGQ YKIISFFAKK ARGLMARYII QNKLTSVEQI KTFDLAGYQY NEAMSKDNDW VFTRKES
|
| |