| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4099 |
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| Symbol | aqpZ |
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| ID | 3518781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4314854 |
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| End bp | 4315552 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637286542 |
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| Product | aquaporin Z |
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| Protein accession | YP_270754 |
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| Protein GI | 71278603 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.53482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAT ATATAGCAGA ATGTATTGGT ACCTTTTGGT TGGTTCTTGG TGGGTGCGGT
AGTGCAGTAC TAGCCGCAGG GTTTCCTGAT GTAGGCATTG GTTTACTTGG TGTATCATTC
GCCTTTGGTT TAACCGTGCT AACTATGGCT TATGCGATAG GTCATATTTC GGGTTGTCAT
TTAAATCCTG CAGTATCGGT AGGTCTTTGG GCTGGAGGAC GTTTTCCTGC TAATGAATTA
ATGCCTTATA TCATTGCACA AGTCATTGGC GCGATTCTTG GCGCTGGCGC TTTATACCTT
ATAGCGAGTG GTCAACCAAG TTTTGATTTA TCAGCTGGTT TCGCGTCAAA TGGTTATGGA
GCACACTCAC CTGGTGGTTA CTCTATGACA GCTGCCCTTG TCGCTGAAGT CGTATTAACT
ATGATGTTTA TTTTTGTCAT TATGGGAGCA ACAGACAAAC GTGCCCCTGC AGGTTTAGCA
CCTATCGCGA TTGGTTTGTG TTTAACCTTA ATTCATTTGA TCAGTATTCC GGTAACGAAT
ACGTCAGTGA ACCCTGCACG TAGCACCGGT GTTGCATTGT TTGTTGGTGA TTGGGCTGTA
GCGCAATTAT GGTTGTTCTG GGTTGCGCCC ATTGTTGGTG GTTTTATTGG TGCTAAGTTA
TATCGCTTAG TTGCGAAAGA AGAACAAGAG GATAGTTAG
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| Protein sequence | MNKYIAECIG TFWLVLGGCG SAVLAAGFPD VGIGLLGVSF AFGLTVLTMA YAIGHISGCH
LNPAVSVGLW AGGRFPANEL MPYIIAQVIG AILGAGALYL IASGQPSFDL SAGFASNGYG
AHSPGGYSMT AALVAEVVLT MMFIFVIMGA TDKRAPAGLA PIAIGLCLTL IHLISIPVTN
TSVNPARSTG VALFVGDWAV AQLWLFWVAP IVGGFIGAKL YRLVAKEEQE DS
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