Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4098 |
Symbol | |
ID | 3518851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4313529 |
End bp | 4314758 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286541 |
Product | hypothetical protein |
Protein accession | YP_270753 |
Protein GI | 71278556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.232873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATC AGCCATTAAC AAATAAAACA TCCCCACGAG TTAAAACAAT CATCACACTT GCTGTGGCAA CGTCACTTAG TATTTCATTT GCGCATGCAA AAGCGAATGT AGAACGTGAA AACAATGAAA TAAGCACGAA AGCAAGCCAG GACACTGAAG TAAATAAAAG CACTGAAAGT AGCTTTGAAG ATGCTTGGGA TTTTGCTGAC TTATATGATA ATGAACAGGG TGATTACCTT AAATTGTCTG GTCGTTTGCA ATTAGACTCT ACTTGGGTTG ATAGCGACCA AGGCGATTTT AACGACACAT TATGGCGTCG ATTTCGCTTC GGTTTTAAAG GCAAGTACGG TGAATTTAAA GTTGCTTTAG AAGCAGATGT AAATTTAAAC GATTCATTAA GTGATGCTTA TAATCGATTA ACTGATGCCA ATGTTAGCTG GTCATTAGAT AAAGACACCG AACTTAAATT CTTAAAGCAA TCTACCGGTT TCACATTAGA CGGTAAGACT TCATCTAAAA AGCTACTGAC ACCACAGCGC AACAACCTAA CAAATAATTT ATGGTTTACC TCAGAGTACT TTACCGGCGT TAGCGTAAAA AGTAAGCTCG CTGATGATTG GTCGTATAAG ACAGGGGTAT TTTCTAGTGA CGGCTCTGAT GAAATATCGA TTAACGATGC CAGTTACTTC GCTATGTTTT CGACCAGTAA AAAGTTAGCA AAAAATAACC TTTGGGACAA AGGTGAAGTT AGCTTTGATT ATGTCTATAA CGACACCCAT GAAGACGGCA ATACCCGTGA CTTCTCTCAA GTTATTAGTA CTTCAAGTAA GTTTAAACAA AACGACTGGG GGTTACAGAG TGATATATCT TGGGGTAAAG GAGACTTAGG CCAAAGTGAT CTCTTTGGTA TTGTCGTCAT GCCAACCTAT CAACAAAGTG AAAAAATTCA GTGGGTTGCT CGTTATACCT ACTTAAGTAG CTCAGAAGAT AATGGCGTTC GTTTAGGCCG TTATGATAGT AAAGTAGTTG ATGATTATGG TCAAAGCAGC GTAGATGGAG AGCGCGGTGA CAAATACCAA GAAGTATATG CTGGCGTTAA CTGGTTTATA AACGAGCATA AATTAAAACT TCAAGCTGGC TTACAGTATG CAAAAATGGA TGATAATGCC AATGATGGTG GCGCTTATGA TGGCTGGAAT TTTACCCTTG CTATGCGTAG TTACTGGTAA
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Protein sequence | MKNQPLTNKT SPRVKTIITL AVATSLSISF AHAKANVERE NNEISTKASQ DTEVNKSTES SFEDAWDFAD LYDNEQGDYL KLSGRLQLDS TWVDSDQGDF NDTLWRRFRF GFKGKYGEFK VALEADVNLN DSLSDAYNRL TDANVSWSLD KDTELKFLKQ STGFTLDGKT SSKKLLTPQR NNLTNNLWFT SEYFTGVSVK SKLADDWSYK TGVFSSDGSD EISINDASYF AMFSTSKKLA KNNLWDKGEV SFDYVYNDTH EDGNTRDFSQ VISTSSKFKQ NDWGLQSDIS WGKGDLGQSD LFGIVVMPTY QQSEKIQWVA RYTYLSSSED NGVRLGRYDS KVVDDYGQSS VDGERGDKYQ EVYAGVNWFI NEHKLKLQAG LQYAKMDDNA NDGGAYDGWN FTLAMRSYW
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