Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4092 |
Symbol | phbB2 |
ID | 3522443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4306609 |
End bp | 4307331 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286535 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_270747 |
Protein GI | 71281971 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGCA TTGCATTAGT AACAGGTGGA ACTCGTGGAA TAGGCGAATC AATTAGCATT ATGCTGAAAG AGCATGGTTA TACTGTCATA GCAAACTACG CTGGCAATGA TCAGGCAGCT CAAGAATTTT CAGAACGAAC AGGTATCCGA ACTTCTAAAT TTGATGTCAG TGATTTTGAA AGTGTAACTA AAAGCATTAA TGATATAGAG TCTGAAATTG GGTCAATTGA TATTCTTGTA AATAATGCAG GAATTACAAG GGATGGCACT ATGCATAGGA TGGACTTTGA AAAATGGAAT GCCGTTATTC AGACCAATTT ATCCTCATGT TTCAATACCT CTCGCGCTGT CATTGAAGGA ATGAGAGAAC GATCATTTGG GCGCATTGTT AATATAGGAT CGGTTAATGG ACAAGCTGGT CAATACGGTC AAGTAAACTA TGCGGCAGCT AAATCTGGTA TCCATGGATT TACTAAAGCA TTAGCACAAG AAGGCGCAGC AAAAGGCATT ACAGTTAATG CTATTGCACC AGGTTATGTT GAAACAGATA TGGTTCGCGC GGTACCTGAA GACGTTTTAG CAAAAATTGT TAAAACAATA CCGGTAGGAC GCTTAGGTCA ACCCGAAGAT ATTGCTCGTT CAGTATTATT TTTAGTGGCC GATGAAGCCG GTTTTGTTAC TGGTTCGACC CTATCCATTA ATGGTGGTCA GCACATGTAC TAA
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Protein sequence | MGRIALVTGG TRGIGESISI MLKEHGYTVI ANYAGNDQAA QEFSERTGIR TSKFDVSDFE SVTKSINDIE SEIGSIDILV NNAGITRDGT MHRMDFEKWN AVIQTNLSSC FNTSRAVIEG MRERSFGRIV NIGSVNGQAG QYGQVNYAAA KSGIHGFTKA LAQEGAAKGI TVNAIAPGYV ETDMVRAVPE DVLAKIVKTI PVGRLGQPED IARSVLFLVA DEAGFVTGST LSINGGQHMY
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