Gene CPS_4092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4092 
SymbolphbB2 
ID3522443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4306609 
End bp4307331 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content40% 
IMG OID637286535 
Productacetoacetyl-CoA reductase 
Protein accessionYP_270747 
Protein GI71281971 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGCA TTGCATTAGT AACAGGTGGA ACTCGTGGAA TAGGCGAATC AATTAGCATT 
ATGCTGAAAG AGCATGGTTA TACTGTCATA GCAAACTACG CTGGCAATGA TCAGGCAGCT
CAAGAATTTT CAGAACGAAC AGGTATCCGA ACTTCTAAAT TTGATGTCAG TGATTTTGAA
AGTGTAACTA AAAGCATTAA TGATATAGAG TCTGAAATTG GGTCAATTGA TATTCTTGTA
AATAATGCAG GAATTACAAG GGATGGCACT ATGCATAGGA TGGACTTTGA AAAATGGAAT
GCCGTTATTC AGACCAATTT ATCCTCATGT TTCAATACCT CTCGCGCTGT CATTGAAGGA
ATGAGAGAAC GATCATTTGG GCGCATTGTT AATATAGGAT CGGTTAATGG ACAAGCTGGT
CAATACGGTC AAGTAAACTA TGCGGCAGCT AAATCTGGTA TCCATGGATT TACTAAAGCA
TTAGCACAAG AAGGCGCAGC AAAAGGCATT ACAGTTAATG CTATTGCACC AGGTTATGTT
GAAACAGATA TGGTTCGCGC GGTACCTGAA GACGTTTTAG CAAAAATTGT TAAAACAATA
CCGGTAGGAC GCTTAGGTCA ACCCGAAGAT ATTGCTCGTT CAGTATTATT TTTAGTGGCC
GATGAAGCCG GTTTTGTTAC TGGTTCGACC CTATCCATTA ATGGTGGTCA GCACATGTAC
TAA
 
Protein sequence
MGRIALVTGG TRGIGESISI MLKEHGYTVI ANYAGNDQAA QEFSERTGIR TSKFDVSDFE 
SVTKSINDIE SEIGSIDILV NNAGITRDGT MHRMDFEKWN AVIQTNLSSC FNTSRAVIEG
MRERSFGRIV NIGSVNGQAG QYGQVNYAAA KSGIHGFTKA LAQEGAAKGI TVNAIAPGYV
ETDMVRAVPE DVLAKIVKTI PVGRLGQPED IARSVLFLVA DEAGFVTGST LSINGGQHMY