| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4090 |
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| Symbol | phaZ |
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| ID | 3519666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4303836 |
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| End bp | 4305053 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637286533 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_270745 |
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| Protein GI | 71278143 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.102252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTATC AAACTTACGA CCTCTATAGT CGCTCCGCCG AAATGATGAA TGGTTTTATC
TCAGTGAATC AACAATTACT GACTCATCCG TTTAACCCGT TTTCAAACAC CCTACTGGGA
AAAAGTATCA ATGCAGCACT TGATAGTGCC TACCATCATA CTAAAGTTTA CGATAAACAA
CCTTTTGACA TTAAAACAAC AATAATTGAT GGTGAAACGG TTAACATTGA CGAACAAGTT
ATTTTAGCAA AACCTTTTTG TAATTTAATC CACTTCAAAC AAGATACTAA AGTTCAACAA
CCTAAACTAT TTTTGGTTGC TCCACTTTCA GGTCATCATG CAACGTTATT AAAAGCAACA
ATAGAGCGTT TAATTTTAGA TCATGACGTT TACATAACTG ATTGGCTAGA TGCTAAAAAC
GTTCCTTTAT CTGAAGGCAA CTTTGATTTT GATGATTATG TAACTTACCT TATCGAGTTT
ATGAAGGAAA TTGGCGAAGA TACCCATGTA TTAGCGGTTT GCCAACCTGC AGTTCAAGCA
CTAATAGCAA CCGCTGTATT GGCTAAAGAT AAAGATGCCG CTACACCTAA ATCTCTAACA
ATAATTGCAG GCCCGATTGA TACCAGTATC AATCCAAACG AACTCAATAA ATATGCCAGT
AGTAAAGATT TAAGTTGGTT TGAAAATAAC GTCATAATGA CGGTGCCTGA GCGTTTTCCT
GGTGCAGGAA GAAAAGTATA TCCGGGCTTT ATTCAATTAA CTTCTTTTAT GGCGATGAAT
ATTGAAAATC ACGTCAAGAA ACACACTGAT TATTTTGGTC ATGTTTTTCA TGGCAAAGAA
GATAAACAAG AAAGTCACCG TGATTTTTAT GATGAATACT TAGCTGTATT AGATCTTAAT
AGTGAGTTCT ATTTAGAAAC TCTAGATCGT GTTTTCATTA ATCAAGATTT AGCGAATGGT
AAAATGACTT ACCATGGTGA GCTTGTTGAT TTATCAGCAA TAACTGATAC TGCATTACAT
ACCATTGAAG GGAAAAATGA TGATATTTGT TCATTAGGCC AAACTCAAGC AGCACAGGCT
TTATGTTCTG GTATTCCAGA GCAAAACAAA TTGGATCAAG TTTTTGATGG TGTAGGCCAT
TTTGGAACGT TTAGTGGCTC GGCTTTCCGT GAAAGAATAG CACCGAGTAT TGCAGAATTT
ATTCAAAAAC ATAAATAA
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| Protein sequence | MMYQTYDLYS RSAEMMNGFI SVNQQLLTHP FNPFSNTLLG KSINAALDSA YHHTKVYDKQ
PFDIKTTIID GETVNIDEQV ILAKPFCNLI HFKQDTKVQQ PKLFLVAPLS GHHATLLKAT
IERLILDHDV YITDWLDAKN VPLSEGNFDF DDYVTYLIEF MKEIGEDTHV LAVCQPAVQA
LIATAVLAKD KDAATPKSLT IIAGPIDTSI NPNELNKYAS SKDLSWFENN VIMTVPERFP
GAGRKVYPGF IQLTSFMAMN IENHVKKHTD YFGHVFHGKE DKQESHRDFY DEYLAVLDLN
SEFYLETLDR VFINQDLANG KMTYHGELVD LSAITDTALH TIEGKNDDIC SLGQTQAAQA
LCSGIPEQNK LDQVFDGVGH FGTFSGSAFR ERIAPSIAEF IQKHK
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