| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4088 |
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| Symbol | phbC |
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| ID | 3520000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4301593 |
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| End bp | 4303356 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637286531 |
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| Product | poly-beta-hydroxybutyrate polymerase |
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| Protein accession | YP_270743 |
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| Protein GI | 71279541 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.150518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCGA ATGAGCAGAA AGAAGTAGCT GATTTTTTAG AGCAATACTC AGAGATATTT
AACACCATGG TTAAACAGGT TTTAAGTGGT TCTGATAAAG AAAATTTAAA TTCAATGATG
GATTCAGAGA AATTAACTGA ACTTTTATCA AAAGGGGTAC AAGTTGATAC TGCTGAGTTA
TTTAGTAAAC AAATGTCTTT TATGACTCAA CAAGCCGAGC TTTGGCAAAA TGCGACTAAA
GCATTATTGG GTTCAAAAGT TGAGTCAGTG GTGTCAGAGG AACGTAATGA TAAAAGGTTT
AAAGACAGTG AATGGTCTGA AAATCCTGTT TATAACTATT TAAAACAGTC TTACCTTTTA
AGTTCTAACA TGATGCAAGA TACGGTTAAT AGTTTGCATT TCGATGATCC CAAAGCTGAA
GAGCAAGTAA AGTTCTATAC TCGACAATAT ATCAGTTCTG TTTCTCCAAC CAATAATGCA
TTAACGAATC CTGAAGTTTG CCGAGACATA TTAGAATCTA AAGGCGAGAA CCTCATCAAG
GGGCTACAAA ACTTTATGCA AGACTTACAA CAAAGTCCTG CGGATGCCCT TAAAATTAAC
CAAACTGACG TGGATGCGTT CACTTTAGGC GAAGACTTAG CATACACGCC AGGTGATGTA
ATTTACCAAA ATGACTTAAT CCAACTTATA CAGTACAAAG CCAGTACTAA AAAAGTCAAT
GAAGTCCCTT TATTGTTTAT CCCTCCTTTT ATTAATAAGT ATTATGTCTT GGACATGGAT
GAGCAAAAGT CACTGATCAA ATGGGCTGTA GGTCAGGGCC ATACAGTCTT TGTAATTTCA
TGGATCAATC CAGACAAGAC ACTTTCTCAT AAAGGCTTTA ATGACTATAT GAAAGAAGGA
CCAATCGCAT CACTTGATGT TATTGAAGAA TTAACTAAAT CAAAGAAAGT GAATGTCGTT
GGTTATTGTA TTGGCGGAAC ATTATTAGCA ACAACCCAAT CATACTTATT GGCAAAAGGT
GATACTCGAA TAAACTCATT GACCTTTTTA ACAACATTAT TAGATTTTGA AGAGCCGGGT
GAAATAGGCG TTTATCTTTC TGAGAAAATG TTACCGTTCT TGAAAAAGGA TATTAAAGAA
AAAGGGTTAT TAGATGGTCG AGTGCTTGGT TTGGCGTTTA GCATGCTACG TGAAAATAGT
CTTTTTTGGT CGTATTTTGT TAATAATTAT TTAAAAGGTA AAGATCCTGC TCCGTTCGAT
ATTTTATACT GGAACAGTGA CTCTTCAAAC TTGCCGGCGG AAACTTTTGA TTTTTATATG
ACCAATACTT ATCAAGAAAA CAACTTGATA AAAGATGGTG CTGTTGAAGT TGAAGGTGTT
CCTATTGAAC TAAGTAAAAT TGATACGCCG AGTTATTTCT TAGCTACAAT CGCGGATCAT
ATTGTTTTAT GGCAGGCATC ATACAAAGGA GCCAAAGCTC TTTCTGGACC TACAAGGTTT
GTTTTAGCTG GCTCTGGCCA TTTAGCCGGT GTTATTAACT CTGTAGATCA CGGTAAATAT
CCACATTGGG TTAATGAAGA GCTTTCTGAT ACCGCGGAAC AATGGTTTGA AAGTTCAACC
AAAAAAGAAG GTTCTTGGTG GACAGATTGG GAAAACTGGG TTGAACCTCA ATCAGGTAAG
CAAGTAACAG CACGTAAACA AGGCTCTAAA AAATACCCAA GTATTGAAGC TGCTCCTGGC
AGCTACGTTA GAAAGCGTAT TTAG
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| Protein sequence | MESNEQKEVA DFLEQYSEIF NTMVKQVLSG SDKENLNSMM DSEKLTELLS KGVQVDTAEL
FSKQMSFMTQ QAELWQNATK ALLGSKVESV VSEERNDKRF KDSEWSENPV YNYLKQSYLL
SSNMMQDTVN SLHFDDPKAE EQVKFYTRQY ISSVSPTNNA LTNPEVCRDI LESKGENLIK
GLQNFMQDLQ QSPADALKIN QTDVDAFTLG EDLAYTPGDV IYQNDLIQLI QYKASTKKVN
EVPLLFIPPF INKYYVLDMD EQKSLIKWAV GQGHTVFVIS WINPDKTLSH KGFNDYMKEG
PIASLDVIEE LTKSKKVNVV GYCIGGTLLA TTQSYLLAKG DTRINSLTFL TTLLDFEEPG
EIGVYLSEKM LPFLKKDIKE KGLLDGRVLG LAFSMLRENS LFWSYFVNNY LKGKDPAPFD
ILYWNSDSSN LPAETFDFYM TNTYQENNLI KDGAVEVEGV PIELSKIDTP SYFLATIADH
IVLWQASYKG AKALSGPTRF VLAGSGHLAG VINSVDHGKY PHWVNEELSD TAEQWFESST
KKEGSWWTDW ENWVEPQSGK QVTARKQGSK KYPSIEAAPG SYVRKRI
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