| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4082 |
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| Symbol | lysS |
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| ID | 3520942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4295466 |
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| End bp | 4297040 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286525 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_270737 |
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| Protein GI | 71280476 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0178605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATA AAGCCAATAA TACACCCGTA GCACAAGATG AAAATAAACT GATTGCTGAG
CGTCGTGTAA AACTTGAAAA AATTCGCTCT AATTGTTCAG CTAATGGTTT TCCTAACGAT
TTTAATCGTG AACATTTAGC CGCTGATATT CAAGCTGAAC ATGGTGAAAA AACCAAAGAA
GAACTTGAAG AGCTACAAGT AACTTATGCT ATTGCCGGTC GTGTTATGGC GAAGCGTGGA
CCATTTTTAG TGATACAAGA CTCGTCTGGT CGTATTCAAG GTTATGCTGA AAAAACAGTG
CAAAAAGAGA TACGTGCTAA ATGGGGTTCA TTAGATATTG GTGATATTGT TGGTATTAAA
GGTATTTTAC ATAAATCAGG TAAAGGTGAT CTTTACGTGA ACATGGATCA TTACTCATTA
TTAACTAAGT CACTTCGTCC ATTACCTGAA AAGTTTCATG GTTTATCCGA TCAAGAAACT
AAGTATCGTC AGCGTTATAT TGATTTAATT ATTAATGAAG ATACCCGTAA TACCTTTAAA
ATGCGTTCAA AAATTGTTGC GGGCATACGT AACTTCTTAA CGCAGCGTGA CTTTATGGAA
GTTGAAACGC CGATGTTGCA AATCATACCG GGCGGCGCAA CGGCTAAACC TTTTATGACG
CATCATAATA CTTTTGATCT TGATATGTAC CTACGTATAG CACCAGAGCT TAACTTAAAG
CGTTTAGTCG TTGGTGGTTT TGACCGTGTG TTTGAAATTA ACCGTAGTTT CCGTAACGAA
GGTATTTCAA CGCGTCATAA TCCAGAATTC ACCATGATTG AATTCTATCA AGCTTACGCT
GATTACCATG ACCTGATGAA CACTACAGAA GAAATGTTAC GTACTATTGC ACAAGATGTA
TTAGGTACTA CCACTATTCG TAATACCGTT AAAAATTCTG AAGGTGAAGT AGTAGAAGAG
AAATTCTACG ACCTAGGTAA GCCGTTTGTA CGCTTATCTA TGGTTGATGC TATTTTACAA
TACGGCAAAG ATCATCGTGG CGCTGAGCAA CTTGATGAAG CGGCTTTACG TGACCCTGAA
AATAATTTTG ATGCAATCAA AGCCATGGCT AAAGCTGTTG GTGTTAAAGA AAACAGTGCT
TCTAAAGTTT GGGGCCCAGG TAAATACATT TGTGAAATAT TTGAAGAAGT TGCAGAACAT
TTATTAGATC AACCTACCTT TATCACGGAA TACCCTTGGG AAGTTTCACC ACTGGCGCGT
CGTAACGATG AAAACTCATT CATAACCGAT AGATTTGAAT TCTTTGTTGG TGGTCGTGAA
CTAGCTAATG GTTTCTCTGA GCTGAACGAT GCAGAAGATC AAGCTGAACG TTTCCAAAAA
CAAGTAGCAG AAAAAGATGC TGGCGATGAT GAAGCTATGC ATTATGATGC CGACTATATC
AACGCCTTAG AGTATGGTTT ACCACCAACA GCAGGTGAAG GTATTGGTAT TGACCGTTTG
GTGATGTTAT TTACTGATTC GCCAACTATC AAAGATGTAA TTTTATTCCC ACATATGCGC
CCAGAAGCGG AATAA
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| Protein sequence | MTDKANNTPV AQDENKLIAE RRVKLEKIRS NCSANGFPND FNREHLAADI QAEHGEKTKE
ELEELQVTYA IAGRVMAKRG PFLVIQDSSG RIQGYAEKTV QKEIRAKWGS LDIGDIVGIK
GILHKSGKGD LYVNMDHYSL LTKSLRPLPE KFHGLSDQET KYRQRYIDLI INEDTRNTFK
MRSKIVAGIR NFLTQRDFME VETPMLQIIP GGATAKPFMT HHNTFDLDMY LRIAPELNLK
RLVVGGFDRV FEINRSFRNE GISTRHNPEF TMIEFYQAYA DYHDLMNTTE EMLRTIAQDV
LGTTTIRNTV KNSEGEVVEE KFYDLGKPFV RLSMVDAILQ YGKDHRGAEQ LDEAALRDPE
NNFDAIKAMA KAVGVKENSA SKVWGPGKYI CEIFEEVAEH LLDQPTFITE YPWEVSPLAR
RNDENSFITD RFEFFVGGRE LANGFSELND AEDQAERFQK QVAEKDAGDD EAMHYDADYI
NALEYGLPPT AGEGIGIDRL VMLFTDSPTI KDVILFPHMR PEAE
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