| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4073 |
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| Symbol | ffh |
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| ID | 3519232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4280365 |
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| End bp | 4281756 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286516 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_270728 |
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| Protein GI | 71279264 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.66452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGACA ATCTTTCCGA ACGCTTAAGT AAAACGCTTA AAAATATTAG TGGCCGTGGC
CGTTTAACCG AAGACAATAT CAAAGAAACT TTACGCGAAG TGCGTATGGC ATTACTTGAA
GCTGATGTAG CTTTACCCGT CATTCGTGAA TTTATCGCCA AAGTAAAAGA AAAAGCTGTT
GGTACAGATG TTTCTAAAAG CCTCACTCCT GGGCAGATTT TTGTCAAAAT AGTTCAAAAA
GAACTTGAAT CAGCGATGGG TGAAGTCAAT GAAGGTCTTG ATTTAAGAGC TGCGCCACCA
GCGGTTGTGC TAATGGCCGG TTTGCAAGGT GCAGGTAAAA CAACTTCTGT AGCTAAACTA
GCCAAATTTT TAACAGAACG TGAAAAGAAA AAAGTATTAG TAGTAAGTGC AGATGTCTAT
CGTCCTGCCG CTATTAAGCA ACTTGAAACG CTAGCTGAAG AAATAAGTGT TGGTTTCTTC
CCGAGTGATA TCAAGCAAAA ACCTATTGAT ATTGCCAATG CTGCCATTGA TCACGCTAAG
AAAAATTTTT ACGATGTGCT AATTGTTGAT ACTGCAGGTC GTTTGCATAT TGATGAAAAC
ATGATGGCTG AGATCCAGCA ACTTCATGCT GCTATCAATC CAATAGAAAC CCTTTTCACT
GTTGATGCTA TGACAGGCCA AGATGCTGCT AATACAGCGA AGGCCTTTAA TGATGCGTTG
CCACTAACTG GTATTATCTT AACCAAAACC GATGGTGATG CCCGTGGCGG TGCTGCGTTA
TCAATCCGTC ATATCACTGG CAAGCCTATT AAATTTATGG GTGTTGGTGA AAAAATTGAA
GCCCTTGAAC CTTTCCATCC AGACCGTATA GCTTCTCGTA TTCTTGGTAT GGGAGATGTG
CTTTCATTAG TTGAAGAAAT TGAGCAAAAA GTTGATAGAA AGCAAGCTGA GAAATTAGCT
AATAAAGTTA AAAGCGGTAA AGGTTTTAGT TTAGAAGATT TTCGTGACCA GCTTGTACAA
ATGAAAAGTA TGGGCGGGAT GACTGGCATG ATGGATAAGC TGCCTGGCAT GGGCAACATG
TCTGGTAAAA TCAAAGATCA AATGGATGAT AAAATTACCG TGCAAATGGA AGCTATTATC
AATTCTATGA CTCCTGGTGA ACGTGAGCGT CCTGACATTA TTAAAGGTTC TCGTAAACGT
CGTATTGCTG TTGGCTCAGG TACTCAAATT CAAGATGTAA ATAAGCTACT TAAGCAGTTT
ACTCAAATGC AAAAAATGAT GAAAAAAATG TCAGGTAAAG GCGGCATGAA AAAGATGATG
CGCAGCATGC AAGGCATGAT GCCACCAGGC GGTGGTGGTA TGGGCGGTGG CGGCGGAATG
TTCGGCCGTT AA
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| Protein sequence | MFDNLSERLS KTLKNISGRG RLTEDNIKET LREVRMALLE ADVALPVIRE FIAKVKEKAV
GTDVSKSLTP GQIFVKIVQK ELESAMGEVN EGLDLRAAPP AVVLMAGLQG AGKTTSVAKL
AKFLTEREKK KVLVVSADVY RPAAIKQLET LAEEISVGFF PSDIKQKPID IANAAIDHAK
KNFYDVLIVD TAGRLHIDEN MMAEIQQLHA AINPIETLFT VDAMTGQDAA NTAKAFNDAL
PLTGIILTKT DGDARGGAAL SIRHITGKPI KFMGVGEKIE ALEPFHPDRI ASRILGMGDV
LSLVEEIEQK VDRKQAEKLA NKVKSGKGFS LEDFRDQLVQ MKSMGGMTGM MDKLPGMGNM
SGKIKDQMDD KITVQMEAII NSMTPGERER PDIIKGSRKR RIAVGSGTQI QDVNKLLKQF
TQMQKMMKKM SGKGGMKKMM RSMQGMMPPG GGGMGGGGGM FGR
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