| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4060 |
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| Symbol | mmsA4 |
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| ID | 3519480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4271694 |
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| End bp | 4273184 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637286503 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_270715 |
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| Protein GI | 71278171 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCG TAGGACATTT GATCAACGGC GAAAATCGCA CAGACGCAAC ACGTCACCAA
GATATATTTA ATCCATCAAC GGGCCAAGTA AGTAATCAGT TAGCAATTGC TGGTAAAGCG
ACCGTTGAAG AAGCAATTGA AGCTGCTAAT GCTGCCTTTC CAGCTTGGCG CGCTACCCCT
CCGGCAAAAC GCGCCCGGGT TATGTTCCGC TTTAAAGAGC TATTGGAACA ACATGCTGAT
AAGATCATTA CCCTGATTGG CGAAGAGCAC GGAAAAATAT CACACGATGC CCAAGGAGAA
TTGCAACGCG GTATCGAAAG CGTTGAATAT GCCTGTGGTG CCCCAGAATT ACTTAAAGGT
GAACATAGTC GTAATGTCGG CCCGTCGATT GATTCATGGA GTGAGTTCCA GCCACTGGGT
GTTGTTGCGG GCATCACTCC GTTTAATTTC CCGGCGATGG TACCCTTATG GATGTACCCA
ATGGCAATTG TTTGCGGCAA TACATTTATC CTAAAACCAT CAGAGCGCGA TCCTAGTTCC
ACACTATTTA TTGCTCAATT ATTAGAAGAA GCGGGGTTAC CACCAGGCGT GCTAAACGTT
GTTAATGGTG ACAAAGAAGC GGTAGATACA CTGCTCCATT CACCAAAAAT TCAGGCAGTT
AGTTTTGTAG GTTCGACCCC TATTGCCGAA TACATCTATG CGACTGCTAG CGCTAACGGC
AAACGCTGTC AGGCACTAGG CGGCGCTAAA AACCACGCCA TCGTATTGCC CGATGCAGAT
ATGGACAACG CTGTTAATCA ACTACTCGGT GCTGCCTTTG GATCTTCAGG TGAACGTTGT
ATGGCTTTAT CTGTGGCAGT CACTGTCGGT AACGCCGCCG GTGATGCGCT AGTTGCTAAA
ATGAAACAAG CGATGACAGG TCTCAAAGTC GGCGCTCATA ACGATAGCAG TAATGATTTT
GGTCCAGTGA TCACCAAACA GCACCAGGAA AAGGTTGTTG GCTATATTAA TAGTGCTGAA
GAAGACGGTG CCAAGATTGT TGTTGATGGC CGTAATCCAA AAATTGCAGG TTTCAGCGAA
GGATTTTTTG TTGGTGGCAC GCTAATCGAT AACGTCACCC CGGAAATGAT CAGTTATAAA
GAAGAGATAT TTGGTCCGGT ATTACAGGTA GTGCGTGTAG AAAGCATGCA AGAAGCAATG
AATCTTATCG ATGCCCACGA GTATGGTAAC GGCACTTGCG TATTTACCCG TGATGGCGAA
GCTGCACGAT ACTTCTCTGA TCATATTCAG GTAGGCATGG TTGGTATCAA TGTACCTTTA
CCAGTACCTG TCGCTTATCA TAGCTTCGGT GGCTGGAAGC GTTCATTGTT CGGTGACTTA
CATGCCTATG GCCCGGATTC AGTTCGCTTT TACACCAAAC GTAAAACTAT TACCCAACGT
TGGCCATCGA CCGGTGTCCG TGAAGGCGCT GAGTTCGCAT TCCCTTCATA A
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| Protein sequence | MSIVGHLING ENRTDATRHQ DIFNPSTGQV SNQLAIAGKA TVEEAIEAAN AAFPAWRATP
PAKRARVMFR FKELLEQHAD KIITLIGEEH GKISHDAQGE LQRGIESVEY ACGAPELLKG
EHSRNVGPSI DSWSEFQPLG VVAGITPFNF PAMVPLWMYP MAIVCGNTFI LKPSERDPSS
TLFIAQLLEE AGLPPGVLNV VNGDKEAVDT LLHSPKIQAV SFVGSTPIAE YIYATASANG
KRCQALGGAK NHAIVLPDAD MDNAVNQLLG AAFGSSGERC MALSVAVTVG NAAGDALVAK
MKQAMTGLKV GAHNDSSNDF GPVITKQHQE KVVGYINSAE EDGAKIVVDG RNPKIAGFSE
GFFVGGTLID NVTPEMISYK EEIFGPVLQV VRVESMQEAM NLIDAHEYGN GTCVFTRDGE
AARYFSDHIQ VGMVGINVPL PVPVAYHSFG GWKRSLFGDL HAYGPDSVRF YTKRKTITQR
WPSTGVREGA EFAFPS
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