| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4048 |
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| Symbol | |
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| ID | 3520250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4257158 |
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| End bp | 4258447 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637286493 |
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| Product | hypothetical protein |
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| Protein accession | YP_270705 |
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| Protein GI | 71279789 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.129032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATT ATATTTCAAT GGTACCTCTA TCGTCAGGTG GTGATGGTTC GTTAACTGCT
TTATTAACGT CAATTTCTCC AAAAGTCAGC GACATCCTCA ATAAGGCGCT CAATGATGAA
GATATCAGTG AGCAAGAAGG ATTGGTCTTA TTCGATACCC AAGGGCTTGA GCTTGATGCT
TTAATTGCGA CTGCCGATGA GTTGCGGATG AAGACTGTTG GTAATTGTGG GACCTTTGTG
ATTACCCGTA ATATCAACTT CACCAATGTC TGTAATATGG GCTGTAAGTT CTGTGGTTTT
GCCAAACGTA AAACCGAAGC AGGTGCTGAA TTGTTGTCGA TGGATGAAAT TGCAAATCGT
GCCCAGGAAG CTTGGGATCG TGGTGCCACT GAAGTTTGTA TCCAAGGCGG TTTACACCCA
GATCTTAAGG GCGATCACTA TCGTAATATT TTAAAAGCTA TCAAGACGCA GGTGCCTGAG
ATGCATATCC ATGCATTTTC ACCGTTTGAA ATTTGGTATG GCGCTCGCAA AAGCAGGATG
TCTACAGCAG ATTTTATCCA GGATTTAATC GATCATGGGC TCGGATCTAT GCCAGGCACG
GCGGCGGAAA TTCTTGATGT GGAGATCCGT AAACAACTGA CCAAGGATAA ACTCAGTACT
GAACAGTGGG TAGATATAAT CACTACAGCT CACAAACTGG GTTTACCAAC CACTGCTACC
ATTATGTATG GCCATGTTGA CAGCCCGAAA CACTGGGTAG AGCATATTGG TAAGATCCGC
AGTATTCAGC AACAAACCGG CGGTTTCACT GAGTTTGTGC CACTGGGATT TGTCCACTAT
GAATCGCCAC TGTATCTGAG CAACCCTAAT GTTCGTCCAG GCCCGACGCC AGATGAAAAT
ATCAAGATGC ATGCCATTTC ACGAGTAATG CTCAATGGCT GGATCGACAA CATCCAAGCA
TCATGGGTCA AACTAGGACC GGATTATGCC ACCGCAATGT TACGGGCAGG TGCCAACGAT
ATTGGCGGCA CTTTAATGAA TGAAAGTATT ACCCGGGCCT CCGGCGGTAA AAACGGTCAA
GAGATTATGC CAGCCGATAT GGTAATGATG ATCGAAAAAG CAGGTTTAAG CGCTGTGCGT
CGTAATACCC TATATAAATC GGTTGAAACC TTCGAGCGAT CTTCACCTCT TGAAATTGTC
AAAAATACCT GTCCCCAAAC TATTTCTGTG GTGGAAATAG CAGTAACAGA AGATGCTGCT
TTGCCAAGAG TTTCTGGAGG TTTGTTATGA
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| Protein sequence | MNNYISMVPL SSGGDGSLTA LLTSISPKVS DILNKALNDE DISEQEGLVL FDTQGLELDA
LIATADELRM KTVGNCGTFV ITRNINFTNV CNMGCKFCGF AKRKTEAGAE LLSMDEIANR
AQEAWDRGAT EVCIQGGLHP DLKGDHYRNI LKAIKTQVPE MHIHAFSPFE IWYGARKSRM
STADFIQDLI DHGLGSMPGT AAEILDVEIR KQLTKDKLST EQWVDIITTA HKLGLPTTAT
IMYGHVDSPK HWVEHIGKIR SIQQQTGGFT EFVPLGFVHY ESPLYLSNPN VRPGPTPDEN
IKMHAISRVM LNGWIDNIQA SWVKLGPDYA TAMLRAGAND IGGTLMNESI TRASGGKNGQ
EIMPADMVMM IEKAGLSAVR RNTLYKSVET FERSSPLEIV KNTCPQTISV VEIAVTEDAA
LPRVSGGLL
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