| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4040 |
|---|
| Symbol | pntB2 |
|---|
| ID | 3519871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 4248468 |
|---|
| End bp | 4249874 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637286486 |
|---|
| Product | NAD(P) transhydrogenase, beta subunit |
|---|
| Protein accession | YP_270698 |
|---|
| Protein GI | 71279414 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTA TATGGATTGA TTTATTATAT CTGGTGGCGG CGGTGATGTT TATCACTGGC
ATCAAGGGAC TAACCCGACC GAAAACTGCA GTCAGGGGAA ATATTGTTGC GGCTATCGGA
ATGTTTATTG CGGTAGTTGT GACACTTCTT AATAGTAAGA TCGTCAGTTA CGAGTTGATC
ATCGCAGGTA TCTTGTTGGG TTCACTGGTT GGTGCGGTAT TAGCTAAAAA AATGCCAATG
ACTAGCATGC CGCAAATGGT GGCCTTGCTA AATGGCTTTG GTGGTGGTGC TTCGCTAGCC
ATAGCTGTGG CCAGTTACCT GGTAATGAGT GTAGGTGCAG AACAGAACAA CGGTCCTTTG
TTGATTGCCT CGCAAGTAGC AATAGTGTTA ACCGTATTGA TCGGTGGTGT GACACTGTCG
GGTAGTGCGG TGGCACTTGC CAAGTTGCAA GAATGGTTAC CAGGAAAATC GATAGGGTTT
CCCGGGATCA AGTTTTTCAA CGTACTGTTG GTAATTAGCG CTTTGTACAT GGGGTATGGT
TTATTTGAGT CGCCCGTCAG TGGTGGTTAT TTGGTGTTAT TGGTGGCTAT TGTCCTTGTA
TTGGGGGTTA CTCTGGTAAT ACCTATCGGC GGAGCGGATA TGCCGGTAGT AATTGCTTTG
TTAAATGCTT ATTCCGGTAT TGCTGCAGCG GCGGCTGGTT TTATCATGGG AAATACAGTG
CTAATAATTT CTGGTGCGCT AGTCGGCGCG TCGGGTCTTA TCCTAACCCA AATTATGTGT
GTGGCGATGA ACCGTTCGTT GGTGAATGTG CTATTTGGTA CCATCGAGAC TGGTAGTGGC
GAAACTATGG ATGCTGATGA AGTCTATGGT GGTAAGGTCA AGTCGTCTTG CCCAGATGAG
GTGGCTATGG TTTTGGAAAC TGCTAGTCGA GTAGTGATTG TTCCAGGATT TGGAATGGCG
ATGGCACAGG CTCAACATGC CGTAAGGGAT CTCGCTGATA CACTCCAGTC ACAAAATATA
GAGGTGGAAT ATGCCATTCA TCCTGTTGCT GGCCGCATGC CTGGTCACAT GAACGTACTC
TTGGCGGAAG CCGAAGTGGA TTATGACCTG ATGAAAACCA TGGACGAAGC TAACCCCACA
TTTGATCAGA CCGATGTGGT GATCGTAATT GGCGCCAATG ATGTAACGAA CCCGATGGCG
AGGGAAGATA AAGGCAGCCC TATTTATGGT ATGCCAATTC TTAATGTCGA CAAAGCCAAA
ACTGTGGTTG TGGTTAAACG TAGTCTCAGC GCGGGATTTG CGGGATTACC CAACCCGTTA
TTTGCCAATG ACAATACTCT GATGTTGTTT GGTGATGGTA AAAAAGCAAT TCAGGACTTA
ACTGCGGCTG TTAATAAAGC TGCATAA
|
|---|
| Protein sequence | MNFIWIDLLY LVAAVMFITG IKGLTRPKTA VRGNIVAAIG MFIAVVVTLL NSKIVSYELI
IAGILLGSLV GAVLAKKMPM TSMPQMVALL NGFGGGASLA IAVASYLVMS VGAEQNNGPL
LIASQVAIVL TVLIGGVTLS GSAVALAKLQ EWLPGKSIGF PGIKFFNVLL VISALYMGYG
LFESPVSGGY LVLLVAIVLV LGVTLVIPIG GADMPVVIAL LNAYSGIAAA AAGFIMGNTV
LIISGALVGA SGLILTQIMC VAMNRSLVNV LFGTIETGSG ETMDADEVYG GKVKSSCPDE
VAMVLETASR VVIVPGFGMA MAQAQHAVRD LADTLQSQNI EVEYAIHPVA GRMPGHMNVL
LAEAEVDYDL MKTMDEANPT FDQTDVVIVI GANDVTNPMA REDKGSPIYG MPILNVDKAK
TVVVVKRSLS AGFAGLPNPL FANDNTLMLF GDGKKAIQDL TAAVNKAA
|
|---|
| |