| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4032 |
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| Symbol | soxB2 |
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| ID | 3523057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4238988 |
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| End bp | 4240238 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637286478 |
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| Product | sarcosine oxidase, beta subunit |
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| Protein accession | YP_270690 |
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| Protein GI | 71282582 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAT ATTCAGGATT TGGTTTATTA AAACACTCGT TAACTTACCA CGAGAATTGG
CAACGGGTTT GGAGTAATCC TACCCCGAAA AAACACTATG ATGTTGTTAT CATAGGCGGT
GGTGGACATG GTCTGGCAAC GGCTTATTAT TTAGCGAAAG AGCATGGCAT CACTAACATT
GCCGTGATTG AAAAAGGTTA TTTAGGCGGC GGTAATACCG CGCGTAATAC CACCATTGTG
CGTTCAAACT ATTTATGGGA CGAAGCGTCT CACTTATATG AGCATTCCTT AAAATTATGG
GAAGGCTTAG CACAAGAGCT GAACTATAAC TTGATGTTTA GTCAACGCGG TGTATTAAAC
CTAGGCCATA CCCTACAAGA CATGCGTGAT ATTGAACGCC GCGTGAATGC TAACCGTCTT
AACGGCATTG ATGGTGAAGT CTTAACCACC GCACAAGTAC AAGAAATGGT GCCTATTTTA
GATTGCTCAA CCAATGCACG TTTTCCGGTG ATGGGCGCTT CATGGCAAGC CCGTGCAGGT
ACGGCTCGTC ACGACGCGGT TGCCTGGGGT TTTGCTCGCG CAGCCGATGC GTTAGGGGTT
GATTTATTAC AGCAAACGGA AGTCACTGGC ATTCGCCGTA AAGATGGCGC AGTAGAGGGC
GTTGAAACCA ATCGCGGCTT TATTTCGGCC GGTAAAGTGG CATGTGTCGC TGCGGGTAAC
TCCAGTGTTA TCGCCAAGAT GGTGGGCATG GAATTACCGC TTGAATCTCA TCCACTGCAA
GCGATGGTAT CAGAGCCATT AAAACCAATT TTAAATACCG TGGTGATGTC CAATCATGTC
CACGGGTATG TCAGTCAATC CGATAAAGGT GACTTGGTCA TCGGCGCGGG TATTGATGGT
TATACCGGTT ATGGTCAGCG CGGCTCTTTT AATGTGGTTG AGCATACTAT TGCCGCCATT
ATCGAAATGT TTCCTATTTT CAGTCGTGTG CGTCTTAATC GCGCCTGGGG CGGCGTGGTT
GATACGTGCC CAGATGCCTG TCCTATCATT TCGAAAACAC ACATCAAAGG ACTGTATTTT
AACTGTGGTT GGGGCACGGG TGGTTTTAAG GCTACGCCGG GCGCTGGGCA TGTCTTTGCG
CATACTATCG CCAACGATGA GCCACACCCG TTAGCCAAAC CCTTTAGTAT CGACCGCTTT
TCATCAGGCG AATTAATTGA CGAACACGGC GCTGCCGGTG TTGCGCACTA A
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| Protein sequence | MQQYSGFGLL KHSLTYHENW QRVWSNPTPK KHYDVVIIGG GGHGLATAYY LAKEHGITNI
AVIEKGYLGG GNTARNTTIV RSNYLWDEAS HLYEHSLKLW EGLAQELNYN LMFSQRGVLN
LGHTLQDMRD IERRVNANRL NGIDGEVLTT AQVQEMVPIL DCSTNARFPV MGASWQARAG
TARHDAVAWG FARAADALGV DLLQQTEVTG IRRKDGAVEG VETNRGFISA GKVACVAAGN
SSVIAKMVGM ELPLESHPLQ AMVSEPLKPI LNTVVMSNHV HGYVSQSDKG DLVIGAGIDG
YTGYGQRGSF NVVEHTIAAI IEMFPIFSRV RLNRAWGGVV DTCPDACPII SKTHIKGLYF
NCGWGTGGFK ATPGAGHVFA HTIANDEPHP LAKPFSIDRF SSGELIDEHG AAGVAH
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