Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4031 |
Symbol | glyA |
ID | 3519081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4237657 |
End bp | 4238910 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637286477 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_270689 |
Protein GI | 71278318 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTACA AAAATGATCA AATAGCCGGT TTCGATGACA GTATTTGGCA AGCCATGGAG CAAGAAGACA AACGTCAACA AGATCACGTT GAATTAATTG CCTCAGAAAA CTATACCAGT GCGCGCGTGA TGCAAGCCCA AGGCAGTCAA CTGACTAACA AATACGCCGA AGGTTATCCT GGTAAACGTT ATTACGGCGG CTGTGAACAC GTTGATGTGA TTGAGCAACT GGCGATTGAT CGTGCAAAAG AATTGTTCGG CGCTGATTAC GCTAATGTAC AACCTCATTC TGGCTCACAA GCCAATGCCG CAGTCTTTAT GGCCTTGCTT AAGCCCGGTG AAACGGTGCT GGGCATGAGC TTAGCGCACG GTGGTCATTT AACCCACGGC TCCAAAGTGA GCTTCTCCGG TAAAATTTAT AACGCGGTGC AATACGGCTT AAATGAAGTA ACCGGTGAAA TTGACTACGA CGAAGTAGCA CGTCTTGCAA AAGAGCATCA ACCGAAAATG ATTATTGCCG GTTTCTCAGC GTATTCACGT GTAGTTGATT GGCAGCGTTT TCGTGACATT GCCGATAGCA TTGGTGCCTG GTTATTTGTT GATATGGCCC ACGTTGCCGG TTTAGTGGCC GCAGGTCTGT ATCCTAACCC AGTACCAATT GCCGATGTGG TAACCACCAC TACCCATAAA ACCTTACGTG GTCCACGTGG CGGCTTGATT TTAGCGAAAC AAAATGACGA ACTGGCTAAG AAATTAAATT CAGCGGTTTT CCCAGCAGGT CAAGGTGGCC CATTGATGCA TGTTATCGCT GCCAAAGCGA TTTGTTTCAA AGAAGCACTT GGTGAGGGTT ATGTTGAGTA TCAGCAACAG GTCATCGATA ACGCCCGTGA AATGGCGAAA ACATTCCAAA CCCGTGGTTA TAACGTAGTT TCTGGTGGTA CGGACAATCA CCTATTTTTA TTGGATTTAA TCGATAAAGG TATTACCGGT AAAGACGCGG ATGCTGCGCT GGGCCGCGCT AATATCACGG TCAACAAAAA CTCAGTGCCT AACGACCCGC AATCGCCATT TGTCACCAGT GGTCTGCGTA TCGGCACACC GGCCATCACC AGTCGTGGTT TTGGACTTGA AGAAGCAGCA GCATTAACGG GTTGGATTTG TGATGTGTTA GATGACATTA GCAATGAGCA AGTGATTGAT GACGTGCGAA GTAAAGTGTT GGACTTATGT GAAAAAAATC CGGTCTACCG CTAG
|
Protein sequence | MFYKNDQIAG FDDSIWQAME QEDKRQQDHV ELIASENYTS ARVMQAQGSQ LTNKYAEGYP GKRYYGGCEH VDVIEQLAID RAKELFGADY ANVQPHSGSQ ANAAVFMALL KPGETVLGMS LAHGGHLTHG SKVSFSGKIY NAVQYGLNEV TGEIDYDEVA RLAKEHQPKM IIAGFSAYSR VVDWQRFRDI ADSIGAWLFV DMAHVAGLVA AGLYPNPVPI ADVVTTTTHK TLRGPRGGLI LAKQNDELAK KLNSAVFPAG QGGPLMHVIA AKAICFKEAL GEGYVEYQQQ VIDNAREMAK TFQTRGYNVV SGGTDNHLFL LDLIDKGITG KDADAALGRA NITVNKNSVP NDPQSPFVTS GLRIGTPAIT SRGFGLEEAA ALTGWICDVL DDISNEQVID DVRSKVLDLC EKNPVYR
|
| |