Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4029 |
Symbol | |
ID | 3519867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4234704 |
End bp | 4235987 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286475 |
Product | Rieske family iron-sulfur cluster-binding protein |
Protein accession | YP_270687 |
Protein GI | 71279410 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTGCT CACATGAACA CGAAAGTTTA CTAGTTACTT CACCAAATAA ATCAGCGCAG GCTGTTGCGG ATGCATTAGA AAAACACCCA ATAACGTTTT CTTTACCACA GCAGTTTTAT AGCGACGCCG ATGTTTTTCA AGTAGAAATG GAACAAATTT TTTACAAAGA ATGGCTGTTC GTTGGCATCA CTGGCGAAAT TCCAGATAAT GGTAATTTTA TCACCTTAGA TATTGGCGAT AACCCGATTA CTGTTATCAG AGATCAAAAT GGTGAAGTAC GCGCTTTTCA TAATACTTGT CGTCATCGTG GTTCTAAAAT TTGTTTAGTT AAACAAGGTA AGGTACCTAA GTTAGTATGT CCTTATCATC AATGGACTTA TGAATTAGAT GGCAATTTAC TCTTTGCAGG CACTGAAATG GGCGATGATT TCGATAAGAA TGATTATGGT CTGCACAAAG TTAATTGTCG TGTTGCTGGT GGTTATATTT TTGTTTCTCT GAGTGAAAAT CCAACAAATA TCGATGGTTT CTTCGATGAT TTAACCCATT ACCTAGAACC ATATGATTTA GATAATTGTA AGGTCGCTGT AGAAAGCACT TTAATTGAAG ATGCTAACTG GAAGTTAGTG ATTGAAAATA ACCGTGAGTG TTATCACTGT AGCGGCAATC ACCCTGAACT ATTAAATACT TTATTAGAGT GGGATGATAC TGAAGATCCA CGCGCTAGTG ATGAATTCAA GGCACAGGTA GCGGCTAAAC AAGCAATGTG GGAAGCAGAA GGCATTCCAT ATAAGCATGT TTCACATGGC CATGGTTTAC GTAACCGCAT AGTACGTATG CCGTTACTTG AAGGCACCGT ATCGATGACG ATTGACGGTA AAGCGGGTTG TAAAAAATTA ATGGGCCGTA TTAAAAACCC TGATCTGGGT TCGATGCGAA TTTTGCACCT ACCTAACTCG TGGAGTCACG CGATGGGAGA TCATTTAATT GCCTTTCAGG TGATCCCATT AGGCGCACAA AAAACTCAAG TAACCACCAA GTGGATAGTC CATAAAGACG CAGTAGAAGG TGTTGATTAT GATGTTGCCC AATTACGCCA AGTATGGGAT GCAACCAATG TGCAAGACAG AACGTTAGCT GAGAATAATC AAAAAGGTAT TAATTCTAAG GCTTACCAAC CTGGACCTTA CTCAACGACC TTTGAGTTTG GCGTGGTGAA TTTTATCGAT TGGTTCAGCC ATACGATGCA AAGTAATATT AAAGCGTCAG CTGAAAAGAG TTAA
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Protein sequence | MSCSHEHESL LVTSPNKSAQ AVADALEKHP ITFSLPQQFY SDADVFQVEM EQIFYKEWLF VGITGEIPDN GNFITLDIGD NPITVIRDQN GEVRAFHNTC RHRGSKICLV KQGKVPKLVC PYHQWTYELD GNLLFAGTEM GDDFDKNDYG LHKVNCRVAG GYIFVSLSEN PTNIDGFFDD LTHYLEPYDL DNCKVAVEST LIEDANWKLV IENNRECYHC SGNHPELLNT LLEWDDTEDP RASDEFKAQV AAKQAMWEAE GIPYKHVSHG HGLRNRIVRM PLLEGTVSMT IDGKAGCKKL MGRIKNPDLG SMRILHLPNS WSHAMGDHLI AFQVIPLGAQ KTQVTTKWIV HKDAVEGVDY DVAQLRQVWD ATNVQDRTLA ENNQKGINSK AYQPGPYSTT FEFGVVNFID WFSHTMQSNI KASAEKS
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