Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4024 |
Symbol | fdhA2 |
ID | 3519490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4227523 |
End bp | 4230423 |
Gene Length | 2901 bp |
Protein Length | 966 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637286470 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_270682 |
Protein GI | 71278181 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACTT ATTATGATCC CAAAACAGAG CCTGCTGCCA ATCAATCAGC CGACCTTAGT AAAGATTTAG GCACACCGCC TTCTAAATCT ACGGTACAAG TTAGCGTAGA AATTGATGGT GTTACTATTG TTGTACCTGA AGGAACTTCA GTATTACGCG CTGCCGCTAT TGCCGATATT AATATTCCCA AATTATGTGC CAGTGATAAT TTAGAAGCCT TTGGTTCATG TCGTTTGTGT GCGGTAGAGA TCGAAGGCAT GCGCGGCATG CCAGCTTCTT GTACTACACC GGTAAGAGAG GGCATGAAGG TACAAACGCA AAATCCTAAA ATAGCGACAT TACGTCGTAA TGTTATGGAA CTTTACATTT CAGACCATCC ATTAGATTGT CTTACCTGTC CGGCCAATGG TGATTGTGAG CTGCAAGATA TGGCAGGTGC CGTCGGTTTA CGTGAAGTAC GCTATGGTTT TGAAGGAAAA AATCACCTCG ACGGAGCAAC TGATTCGTCG AATCCTTATT TCAGCTTTGA TGATTCTAAA TGTATTTCCT GTTCTCGTTG TGTCAGAGCG TGTGAAGAAG TACAAGGTAC CTTTGCCTTA ACGGTTGAAG GTAGAGGTTT TGATTCACGT ATAAGTACTG GTCAAGACAC TAACTTTCTA GAATCTGACT GTGTTTCATG TGGCGCCTGT GTACAAGCTT GTCCAACAGC TACACTCACT GAAAAATCTG TAATAGATAA TGGCCAGCCA GATCATAGCA TCATTACTAC CTGCGCTTAT TGCGGTGTAG GCTGTTCGTT CCGCGCTGAT ATGCAAGGCG ATAAAGTACT GAGAATGGTG CCAGATAAAA ATGGTAAAGC GAACCAAGGA CATTCTTGTG TTAAAGGCCG ATTTGCTTTT GGCTACGCTA CTCATCAGGA CAGAATAACT AGCCCGATGA TTCGCGATAA TATAGAACAA GACTGGCGTG AGGTGAGTTG GGAAGAAGCA TTAGCCTTTG CTGCTAAGCG CTTAACCGAT ATTCAAGAAG AACATGGCCG CAACAGTATC GGCGCGATAA CGTCGTCTCG TTGTACCAAT GAAGAAACCT ATTTAGTACA GAAACTAGTC CGTGCAGTTT TTCAAAATAA TAATGTCGAT ACCTGTGCCC GCGTTTGTCA TTCGCCAACA GGTTATGGCC TAAAAGCTAC CTTAAACGAG TCAGCAGGAA CACAAACCTT TGAATCGGTG ATGAAAGCTG ATGTGGTACT CATCATTGGC GCCAACCCTA CCGATGCGCA TCCGGTATTT GGTTCATTAC TTAAACGTCG TTTACGCCAA GGGGCTAAAT TAGTAGTGGC CGATCCGCGC AGCATCGATC TTATCGACAG TCCGCATACC AAAGCACAAC ATCATCTTAA ACTGCGTCCT GGGACAAACG TGGCATTAAT CAATGCCCTC GCCCATGTCA TTGTTGATGA AGGTTTAGAA GATGCTGACT TCATTCAAAG TCGTTGTGAT GATGCTAGCT TCCAGCAATG GTACAAACAT ATTCAAGACC AACGCCATTC ACCAGAAAGC ACAACAGAAA TTACCGGTGT CGACGCAACA GAGTTACGCG CAGCGGCCAG ACTATATGCT AACGCGGGTA ACGGCGCTAT TTATTACGGT TTAGGTGTTA CAGAACACTC TCAAGGCAGT TCATCTGTCA TGGCTATTGC TAACTTAGCA ATGGTTAGCG GAAATATTGG TCGAGAAGGT GTTGGTGTTA ATCCACTGCG CGGCCAAAAT AATGTACAAG GCTCATGTGA TATGGGTTCG TTTCCACATG AGTTGCCAGG ATATCGCCAT GTTAGCGATG AAAGCACCCG TAATTTATTT GAACAAGAAT GGCAAGTTTC ATTGGATTGT GAGCCTGGTT TGCGCATTCC AAATATGTTC GAAGCAGCAA TACACGGTGA CTTTAAAGGT TTGTATTGCC AAGGCGAAGA TATTGCTCAA TCGGATCCAA ATACTCAGCA TGTACAAAAA GCGTTAAGTT CGATGAAATG CATCATTGTA CAAGATATCT TCCTTAACGA GACGGCAAAA TACGCCCATG TATTTTTACC CGGCTCATCG TTTATGGAAA AAAATGGTAC CTTCACCAAT GCCGAACGAC GCATTTCTAG AGTACGTAAA TTGATGCCAG CACTAGCAGG TAAAGAAGAT TGGCAAGTAA CGATTGAACT TGCCAAAGTA CTCGGTTATG AAATGAATTA TGAGCATCCA AGTGAGATAA TGGATGAAAT TGCCCGCTTA ACACCAACAT TTAGTGGTGT CAGTTATGAA AGGTTAGATC AGCTTGGCTC TATTCAATGG CCATGTAATG AAAAATCGCC TCTAGGCACG CCAATTATGC ATACCGAGGA TTTTGTTGGC GAAAAAGGCA AGTTTGCGAT TACTGAGTAT GTGGCCACAC CTGAAAAAGC GAATAAGCAT TTTCCGTTGT TATTGACCAC AGGCCGTATT TTAAGCCAAT ATAATGTTGG CGCACAAACA AGACGTACTG CCAATCAAGT TTGGCACGAT GAAGATGTAT TAGAAATCCA CCCTAATGAC GCTGAAGATC GTGGCATCAA TGATGGTGAT TGGGTAGGTA TTGCCAGTCG TGCAGGTACC ACCGCACTAC GCGCACTCAT TAGCCAACGC GTTCAACCAG GGGTTGTTTA TACTACCTTC CATCACCCGT TAAGTGGTGC CAATGTAGTC ACCACTGACA ATTCTGATTG GGCAACTAAC TGTCCTGAAT ATAAGGTAAC AGCAGTGCAA GCAACTAAAG TTGATGAGCC GTCGCAATGG CAAGCAGAAT ACGCCCAGTT CAGTCAGCGA CAAGCGAAAT ACTTAAAGAA TAAAAATGGG GGGGAAGTTG CTAAAACATG A
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Protein sequence | MITYYDPKTE PAANQSADLS KDLGTPPSKS TVQVSVEIDG VTIVVPEGTS VLRAAAIADI NIPKLCASDN LEAFGSCRLC AVEIEGMRGM PASCTTPVRE GMKVQTQNPK IATLRRNVME LYISDHPLDC LTCPANGDCE LQDMAGAVGL REVRYGFEGK NHLDGATDSS NPYFSFDDSK CISCSRCVRA CEEVQGTFAL TVEGRGFDSR ISTGQDTNFL ESDCVSCGAC VQACPTATLT EKSVIDNGQP DHSIITTCAY CGVGCSFRAD MQGDKVLRMV PDKNGKANQG HSCVKGRFAF GYATHQDRIT SPMIRDNIEQ DWREVSWEEA LAFAAKRLTD IQEEHGRNSI GAITSSRCTN EETYLVQKLV RAVFQNNNVD TCARVCHSPT GYGLKATLNE SAGTQTFESV MKADVVLIIG ANPTDAHPVF GSLLKRRLRQ GAKLVVADPR SIDLIDSPHT KAQHHLKLRP GTNVALINAL AHVIVDEGLE DADFIQSRCD DASFQQWYKH IQDQRHSPES TTEITGVDAT ELRAAARLYA NAGNGAIYYG LGVTEHSQGS SSVMAIANLA MVSGNIGREG VGVNPLRGQN NVQGSCDMGS FPHELPGYRH VSDESTRNLF EQEWQVSLDC EPGLRIPNMF EAAIHGDFKG LYCQGEDIAQ SDPNTQHVQK ALSSMKCIIV QDIFLNETAK YAHVFLPGSS FMEKNGTFTN AERRISRVRK LMPALAGKED WQVTIELAKV LGYEMNYEHP SEIMDEIARL TPTFSGVSYE RLDQLGSIQW PCNEKSPLGT PIMHTEDFVG EKGKFAITEY VATPEKANKH FPLLLTTGRI LSQYNVGAQT RRTANQVWHD EDVLEIHPND AEDRGINDGD WVGIASRAGT TALRALISQR VQPGVVYTTF HHPLSGANVV TTDNSDWATN CPEYKVTAVQ ATKVDEPSQW QAEYAQFSQR QAKYLKNKNG GEVAKT
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