| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4011 |
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| Symbol | betB2 |
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| ID | 3519839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4209714 |
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| End bp | 4211177 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637286457 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_270669 |
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| Protein GI | 71279384 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.213647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCTAA TTAAATATAA AAACTATGTT GATGGTGCAT ATACAAGCAA TGGCACAGGG
GAAACGTTTG ATGTTACGAA CCCGGCAACG GGTCAGGTCA TTTATCAGGT AGAAATTGCT
GATGAACTGA TAAAAAGTAA AGCTATCGAA AGCGCTAAGC GAGGATTTGC CCAGTGGTCT
GCGATGAGCG CGACCGAGCG CAGCCGAGTA TTATTAAAAG CGGTCGACTT ACTGCGTGAA
CGAAATGATG AATTGGCAGA AATCGAAGTT TTGGATACGG GTAAACCATG GCAAGAGGCT
AGCGTGGTTG ATGTGCAGTC GGGCGCCGAT TCTATTGAAT TTTTTGCCGG TCTGGCACCA
GGCATTGAAG GTAATCAGCA ACAAGTAGGG GCTGATTTTT ACTACACACG CCGCGAAGCT
TTAGGTATTT GTGCCGGTAT TGGCGCATGG AATTACCCAT TACAAATTGC TTGTTGGAAG
GCTGCTCCTG CTCTTGCTTG TGGTAATGCA ATGATATTCA AACCCTCTGA AGAAACACCG
TTAGGTGCTC TCAAATTGGC GGAAATCTTT AGTGAAGCCG GTTTGCCTGA TGGGGTATTT
AACGTGCTGC AAGGAGCAGG GGATGTCGGT TCGTGGTTAA GCCATCACCC AGAGATTGCT
AAAGTTTCTT TTACTGGTGA AGTGGGTACG GGTAAGAAGG TCATGGCAGG TGCTGCCACC
ACGTTAAAAG ATGTCACCAT GGAACTGGGT GGAAAATCAC CGCTTATCAT CTTTGATGAC
GCTGATGTTG ATAACGCGGT ATCGGCGGCG ATGTTAGGTA ATTTTTATAC CCAAGGCGAA
ATTTGCACTA ATGGCACACG TGTTTTTGTG CAGAAAGAAA TTTATCCAAC CTTTATTAAA
AAACTAGTAG AGCGCACTAA AAACAACATT ATTGTTGGCG ACCCCATGGA TCCTGAGACT
AACTTTGGTG CGCTGATCTC AGCCAAGCAT CAACGCTTAG TACTCGATTA TATCGACCTA
GGCCTAAAAG AAGGTGCGAC CTTGTTGCAA GGTGGCGCTG CGCTAAACCC AATAGGTTGT
GATGCTGGCT ATTTTGTCGA ACCCACCATA TTTACTGATT GTAATGATGA TATGCGTATT
TGCTGTGAAG AAATATTTGG TCCAGTAATG TCGGTGTTGA CCTTCGACGA TGAAGACGAG
GTTATCAAGC GTGCTAATGC AACTGAATTT GGCCTTGCTG CTGGCGTATT CACCCAAGAC
ATCACTCGTG CTCATCGGGT TATACATCAA ATGCAAGCAG GCATTTGTTG GATTAATAGC
TACGGACTTT CACCAGCAGA AATGCCTGTG GGCGGATATA AACTCTCGGG TATTGGCCGA
GAAAATGGTC TAGCGACATT AAACCACTAC ACCCAAATTA AAGCGGTATA CGTTGGTTTA
GAACCACTCG AAAGTCCTTT TTAA
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| Protein sequence | MPLIKYKNYV DGAYTSNGTG ETFDVTNPAT GQVIYQVEIA DELIKSKAIE SAKRGFAQWS
AMSATERSRV LLKAVDLLRE RNDELAEIEV LDTGKPWQEA SVVDVQSGAD SIEFFAGLAP
GIEGNQQQVG ADFYYTRREA LGICAGIGAW NYPLQIACWK AAPALACGNA MIFKPSEETP
LGALKLAEIF SEAGLPDGVF NVLQGAGDVG SWLSHHPEIA KVSFTGEVGT GKKVMAGAAT
TLKDVTMELG GKSPLIIFDD ADVDNAVSAA MLGNFYTQGE ICTNGTRVFV QKEIYPTFIK
KLVERTKNNI IVGDPMDPET NFGALISAKH QRLVLDYIDL GLKEGATLLQ GGAALNPIGC
DAGYFVEPTI FTDCNDDMRI CCEEIFGPVM SVLTFDDEDE VIKRANATEF GLAAGVFTQD
ITRAHRVIHQ MQAGICWINS YGLSPAEMPV GGYKLSGIGR ENGLATLNHY TQIKAVYVGL
EPLESPF
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