Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4003 |
Symbol | |
ID | 3522261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4201041 |
End bp | 4201964 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286449 |
Product | membrane protein |
Protein accession | YP_270661 |
Protein GI | 71281789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0116416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA GCTTAGGGTT TAAGGTCTCA GTAAGCTTCG TTAATATATT TGCATTACCC TTCTTTTTTG TATTGCTTTA TGGCAGTGGG TTTGTAGGTG CAAAACTCGG ATTACCACAC TCCACTCCTT TGAGTTTTCT AAGTTTACGC TTCATGGCTG CAGGTTTGAT ATTACTAATT ATTGCGAAAT TGATTGGTAA CCAACTCCCG AACTGGCGTG AAGCGATACA TATTTCGGTA GCTGGAAGCT TAACTGTCTG TCTATTTTCT GTTGGTGTAT TTGTATCAAT TGATATGGGG CTTTCCCCAG CAGTTTCGGC ATTAATTGTT GCACTACAGC CTATTCTGGT AGCTCTATTT GCACGAAAAC TGGTTAATGA ACAACTTAAC TTAGCCCAAT GGTTTGGATT GCTCTTTGGA TTTTTAGGAG TCATCGTCGT TGTCATTGAT TCAATTGAAA CAACGTCTTT CAGTTGGGTT GCTATAGCTA TGTCCGTGCT TGCTTTGTTT GGTGTTACCT TTGGAAGTCT TTATCAGAAG CGTTATTGCG CAGATATGGA GATATTTTAT GGAGGTGCGA TTCAGTCTCT GGTTTCGGGC TTAATATGTT TAGCATTGTT ACCGTTTTTT GAAAGCTTTA AGGTCGTTTG GACAGGTGAA TTTATTATAT CGCTAGTTTA TATGGTCGTC GGGGTATCAC TAGGGGCATT AAGCTTGCTT TATATAATGA TCCAGCGGGG AGAGGTAAGC AGAGTCGCAA GTGTATTTTA TTTAGTCCCT GTTTCTGCGG CAGTTAGTGC TTATCTTTTA TTTGGTGAAA CCATTGAGAG CACTACATTG TTCGGGGCAA GCATTATTGC TTTGGGTATT TTCCTGACCA ACCGTAAATC TCAAAATAAC ATGGTGGTTT CTATGAATAA ATAG
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Protein sequence | MSKSLGFKVS VSFVNIFALP FFFVLLYGSG FVGAKLGLPH STPLSFLSLR FMAAGLILLI IAKLIGNQLP NWREAIHISV AGSLTVCLFS VGVFVSIDMG LSPAVSALIV ALQPILVALF ARKLVNEQLN LAQWFGLLFG FLGVIVVVID SIETTSFSWV AIAMSVLALF GVTFGSLYQK RYCADMEIFY GGAIQSLVSG LICLALLPFF ESFKVVWTGE FIISLVYMVV GVSLGALSLL YIMIQRGEVS RVASVFYLVP VSAAVSAYLL FGETIESTTL FGASIIALGI FLTNRKSQNN MVVSMNK
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