| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4002 |
|---|
| Symbol | |
|---|
| ID | 3522654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4199891 |
|---|
| End bp | 4200748 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637286448 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_270660 |
|---|
| Protein GI | 71282181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA TTTGTATATC AATGACTCTA CTGCTTTCTA CTCTAACGAT GAGTAACAAA
AGCTTTAGTC AATATGAATT TCCAGTACTG AAAGGCCCCT ATATGGGACA AGAACCACCA
GGTTTGGTGG CAGAGCCATT TGCACCTGGC ATTATTTCTA AACAAGGCTG GGAGCTTGAA
GGCGTGTTTG CGCCCGGCAT GAAAGAATTT TACTTCACGA CAAACCGAAA AAGCGCAACC
GTTATCGGTT TTCGTCAGCA AAATAATGTT TGGAAGAAAT ATATAGAATT CCCTAGGACA
GGTGAAATTG TATTTTCGCC TGACGGAAAA CGTATGCATA TGGCAAAAGG CTATAAGGAC
CGCATTGGCG ACGGCTGGTC AGAACGCAAA AGTCTTGGAC CTATGTTTGA CCGAAAAGAC
TGGGGTATTA TGCGCCTGTC GGCCTCAGCC AAAGGCACCT ATGTTTTTGA CGATTATAAA
AGCAATGACG TAATTCGTAT ATCAACATTC AAGGACGGAA AACGCCAAGC GCCAACAATG
ATGGACCCAG TGGTCAACAC AGGTAAATGG ACAGCTCACC CCTTTATTGC GCCAGACGAA
AGCTACCTGA TTTGGGATAG CGAACGAGAA GGCGGCTATG GAGGCTCTGA TCTTTATATT
AGGTTCCGGA CAAAGGATGA TGCATGGGGC CCTGCAATTA ATTTGGGCGA CAAGGTTAAT
TCTGATAAAA ATGAATTCTA TGCGAGTGTC ACCTCTGATG GTAAGTACAT ACTCTTCAAC
AGAGGCATGG ATGATAAGGG TAATATAGAT ATTTACTGGG TGGATGCACA GATTATTGAA
ACCCTCAGGC CAAAATAG
|
|---|
| Protein sequence | MKHICISMTL LLSTLTMSNK SFSQYEFPVL KGPYMGQEPP GLVAEPFAPG IISKQGWELE
GVFAPGMKEF YFTTNRKSAT VIGFRQQNNV WKKYIEFPRT GEIVFSPDGK RMHMAKGYKD
RIGDGWSERK SLGPMFDRKD WGIMRLSASA KGTYVFDDYK SNDVIRISTF KDGKRQAPTM
MDPVVNTGKW TAHPFIAPDE SYLIWDSERE GGYGGSDLYI RFRTKDDAWG PAINLGDKVN
SDKNEFYASV TSDGKYILFN RGMDDKGNID IYWVDAQIIE TLRPK
|
|---|
| |