| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3998 |
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| Symbol | |
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| ID | 3519947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4197953 |
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| End bp | 4198177 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286444 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_270656 |
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| Protein GI | 71279488 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00426277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACCAAAT CGCTGCGAAA GGCGCTTAAC CAAACAAGTA TTAGGAAACA TGTAACAGCA
CACACCTTTC GTCATAGCTT TGCTACACAA CTATTGTTAA ACGGTGCCGA CATTAGCACA
GTGCAAGAGC TATTAGGACA TAATGATTTG AGAACCACCC AAATATATAC CTATGTAATT
GGACAGCACT CCTCTGGTAC AACGAGTCCT ATGGATAGAA AATAA
|
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| Protein sequence | MTKSLRKALN QTSIRKHVTA HTFRHSFATQ LLLNGADIST VQELLGHNDL RTTQIYTYVI
GQHSSGTTSP MDRK
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