Gene CPS_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3992 
Symbol 
ID3523277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp4187999 
End bp4188631 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content40% 
IMG OID637286438 
Producthypothetical protein 
Protein accessionYP_270650 
Protein GI71278996 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.183821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAA GAATGAACTT TGATAATAAG CACAGTAAGA TAATCAGTGA CTTTTTTGGC 
TGTGATTTTA GCGCTGCTTC AAACAATAAC CTTAGTCCTG GGCAGACAGT TTCCACGCTG 
GTTAACCGTG ATATAAATGA CCATTCAAAC AGTGTTTCAA ATGACGAGGC AGCTTTTCAG 
CAGCTTGATT CTACTTGGGG TATTCAACCC AGTTGGTCAA AGCGATTACT TATTAATGCT 
CAAAGTGAAA CTGTACTTAC TAAAGCTACT TTTAAAGACG CGATAAAAAC ACACCGATGT 
TTAATTCCTT GCGCTGGCTG GTATGAGTGG CGAACTGAAG GGGACAAAAA ACAAAAGTAC 
TTATTTAGTC ATGTTAATGA CGAGCCCTTT CTCATGGCGG GAATTTGGTA TGTGAAGCAA 
AACCAAAGTA ATAACGAAGC ATTGACTCCT GAGCCCAAAC AATTGGTCAC TCTCACCACC 
GCGCCTAATG ACAAATGCGC TGAATATCAT CAACGTATGC CAGTCATTGT ATTACCGCAA 
TATCGTGATT ATTGGTTCCA TTCAACTGCA GAGCAATTAT CGCCTTTATT TGAAGCGATA 
GACCAAGGTT ATATCAAAGT AACTGCTGCT TGA
 
Protein sequence
MCGRMNFDNK HSKIISDFFG CDFSAASNNN LSPGQTVSTL VNRDINDHSN SVSNDEAAFQ 
QLDSTWGIQP SWSKRLLINA QSETVLTKAT FKDAIKTHRC LIPCAGWYEW RTEGDKKQKY 
LFSHVNDEPF LMAGIWYVKQ NQSNNEALTP EPKQLVTLTT APNDKCAEYH QRMPVIVLPQ 
YRDYWFHSTA EQLSPLFEAI DQGYIKVTAA