Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3977 |
Symbol | |
ID | 3522732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4171460 |
End bp | 4172431 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286423 |
Product | LysR family transcriptional regulator |
Protein accession | YP_270635 |
Protein GI | 71282259 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTGA CATTATCCAT AACTTTTACT AAACTAAAAC ACACTAATAG TACGAACACT TTCAAATATA AGTTAATAAT GAATACTTCA GATCTAAATC TATTCATACG AATTGTCGAA ACAGGCAGCA TAACGGAAAC CGCAAACCAA GTTAATCTAA CGCCTGCGGC AGTCAGTTCA GCTCTCAAAA GATTAGAAAA ACAGTTAGAT GTACAGTTAC TTATTAGAAC GACAAGACAA TTGAGGATTA CGCCACAAGG AGAGCAATTT CTGTTTCATT GCCGCAATGC GTTAGCTAGT TTAGAGCAAG GGCGTATATC GGCACATCAG ACACAAGGTA AGGTGAGTGG GAAGCTGAGG TTATCCGTTT CGTCTGACTT AGGTCGTAAT ACCCTTTTAC CTTGGATAGA AGAGTTGCTT GAAGAGCATC CTTTATTGTC GATTGACTTG ACTGTAGGTG ATTCAGTTTC AGACTTTTAC TTAGATCAAG TTGACATGGC CCTTCGTTTT GGGAAGCCAG AGGACTCATC CATGGTTTCA TTTCAGATTG CAACTATGAG TAGAATCACT TGCGCATCTC CTGCTTATAT ATCGAAGTAT GGAAATCCAG AAACCCCAGA AGATCTGCGT AATCATAATT GTTTATTACA CCGTAGAGCT GGTCGTTTAT TTGATCATTG GGAGTACACT GATAGTTTAG GTACATACAA AATCAAAGTT AATAGCAATA GAATAAGTAA TGACACAGAT ATAGTGAGAC GTTGGGCTGT TAGTGGTAAA GGTATTGTCT ACCGCTCCCT GATTGATGTT TATTCAGATT TAAATAGCGG ACAGCTTGTA CAGCTCTTAT CGGGTTATGA TTCGTCTTCT GTTGAACTGC ATTTGATTTG TCCAAACAGA GAGCAGGTCA GCCCCGCAGT GATTGCATTT AGGGAGCTTC TTAGGAGCAA AATTTCAAAA GTTCTCTCTT GA
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Protein sequence | MIVTLSITFT KLKHTNSTNT FKYKLIMNTS DLNLFIRIVE TGSITETANQ VNLTPAAVSS ALKRLEKQLD VQLLIRTTRQ LRITPQGEQF LFHCRNALAS LEQGRISAHQ TQGKVSGKLR LSVSSDLGRN TLLPWIEELL EEHPLLSIDL TVGDSVSDFY LDQVDMALRF GKPEDSSMVS FQIATMSRIT CASPAYISKY GNPETPEDLR NHNCLLHRRA GRLFDHWEYT DSLGTYKIKV NSNRISNDTD IVRRWAVSGK GIVYRSLIDV YSDLNSGQLV QLLSGYDSSS VELHLICPNR EQVSPAVIAF RELLRSKISK VLS
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