Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3973 |
Symbol | exbD3 |
ID | 3520093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4167581 |
End bp | 4167991 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286419 |
Product | biopolymer transport exbD protein |
Protein accession | YP_270631 |
Protein GI | 71279634 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCATT TAAATCAAAT GTTACAAGAT CAAGATGAAA AAGAAGAAAT TGATATGACA CCCATGCTTG ATGTGGTGTT TATTTTACTC ATATTTTTTA TTGTAACTGC CTCATTTGTT AAAGAAGCAG GTATTGATGT TAATCGTCCT GAAGCCGCTA CAGCGGTAAA GAAAGAGCGT GCCAATATCT TAGTTGCTAT TAGTGATAAG GGCGATATTT GGATCAATAA ACGCAAAGTG GATATTCGCA GTGTACAAGC GAATATTGAG CGTTTAAAAG CAGAGAACCC ACAAGGTACT GTTGTGATTC AAGCGGATAA AAAGTCGACC ACTGATACCT TAATTAAGGT GATGGATTCT GCCCGTGCCG CCGGGGTTTA TGATGTATCT ATTGCCGCGC AAGAGGCCTA G
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Protein sequence | MRHLNQMLQD QDEKEEIDMT PMLDVVFILL IFFIVTASFV KEAGIDVNRP EAATAVKKER ANILVAISDK GDIWINKRKV DIRSVQANIE RLKAENPQGT VVIQADKKST TDTLIKVMDS ARAAGVYDVS IAAQEA
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