Gene CPS_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3973 
SymbolexbD3 
ID3520093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4167581 
End bp4167991 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content40% 
IMG OID637286419 
Productbiopolymer transport exbD protein 
Protein accessionYP_270631 
Protein GI71279634 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATT TAAATCAAAT GTTACAAGAT CAAGATGAAA AAGAAGAAAT TGATATGACA 
CCCATGCTTG ATGTGGTGTT TATTTTACTC ATATTTTTTA TTGTAACTGC CTCATTTGTT
AAAGAAGCAG GTATTGATGT TAATCGTCCT GAAGCCGCTA CAGCGGTAAA GAAAGAGCGT
GCCAATATCT TAGTTGCTAT TAGTGATAAG GGCGATATTT GGATCAATAA ACGCAAAGTG
GATATTCGCA GTGTACAAGC GAATATTGAG CGTTTAAAAG CAGAGAACCC ACAAGGTACT
GTTGTGATTC AAGCGGATAA AAAGTCGACC ACTGATACCT TAATTAAGGT GATGGATTCT
GCCCGTGCCG CCGGGGTTTA TGATGTATCT ATTGCCGCGC AAGAGGCCTA G
 
Protein sequence
MRHLNQMLQD QDEKEEIDMT PMLDVVFILL IFFIVTASFV KEAGIDVNRP EAATAVKKER 
ANILVAISDK GDIWINKRKV DIRSVQANIE RLKAENPQGT VVIQADKKST TDTLIKVMDS
ARAAGVYDVS IAAQEA