| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3968 |
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| Symbol | |
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| ID | 3522160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4157523 |
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| End bp | 4159895 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286414 |
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| Product | penicillin-binding protein |
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| Protein accession | YP_270626 |
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| Protein GI | 71281688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.337015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAC AAGGGTTAAC AACCATTATT CGTTGGTGTA AACATCAACG AATAGTGGTC
TTTTTGGCGT TAGCCTTGTT TATGTCACTC GCTGTGTTAT TTACGCTTGA TAGTCTTTAC
CCATTAAACT TACCTGAGAA AAATAACTTA TTTGCCCGTG TTGTGGTGGA TGAAAATGAT
CGACCATTAC GAAGCTTTGC TGATAAAAAT GGTATTTGGC GTTACCCGAT AAAATTGCAT
CAAGTCTCCC CACTCTATAT CGACGCATTA ATTAATTATG AAGATCGCTG GTTCTGGCAT
CACCCGGGCA TAAATCCGTT TTCATTGCTC AGAGCGACAA TGCAAAATGT CGCGAGTAAT
AAAATTGTTT CTGGTGGCTC AACACTCTCA ATGCAAGTGG CGAGGATTTT ACATCCGCAC
AAGCGAAGTT TATGGGGAAA AACCAAGCAA GTATTAAGAA CATTACAACT AGAGTGGCAG
TTAGATAAAA AGCAAATTCT ACAGCTTTAT CTTAATACTG CGCCTTTTGG TGGAACGATT
GAAGGAGTGC AGGCGGCAAG CTTTACCTAC TTAAATAAAT CGGCAAAAGA GCTTACTCAT
GCGGAAGCTG CTTTACTGGC GGTTCTCCCA CAAGCACCTA CTCGATATCG TCCTGATTTA
CATGCCTTAG CAGCTCAAAA AGCGAGAAAT AAGGTATTAC AAAGGCTTGC AGATTTTGAT
GTATGGCCAC AAGAAATTGT GGATGATGCA ATGTTAGAGC AAGTTTTTAG CTTTAATTTT
CGCCCTAAGC AATTAGCGCC ATTACTGGCT CGGCGGTTAT TGAATCATTC CAATGGTCAA
TCGGTGGTAA AAAGCACTAT TGATAGTGAC TTGCAGCTGG CGTTACAAGA TTCACTTACC
TCTTATATGA CAAGGTTACC TAAACAAAGC TCAGCGGCTA TTTTAGTGGT AGACAATAAA
AACTCGGCAG TGAAGGCCTA TATTGGCACC GCTGATTTTG CTAATGCAGA GCGACATGGT
TATGTCGATA TGGTGCAGGC CATCCGTTCT CCGGGGTCTA CCTTAAAACC GTTTATTTAT
GGCTTAGCAT TAGATGAAGG CTTGATTCAT TCACATTCTT TACTGGCTGA TGTTCCGCGC
AGTTGGGGGG ATTATCGCCC CAGTAATTTC AATGGTGCCT TTAATGGACC TGTGTCAGCG
GCAGAAGCCT TGAAGCGTTC TCTCAATATG CCAGCAGTAG ATCTTTTAGA GCGCTATGGC
GTTAATCGTT TTGTTGCGCA ATTAGAAAAT GCGGGTTTAA CCCTATCAAT TCCAGGTGGA
AAACCCAACT TAGCCATTAT TTTAGGTGGC GCAGGAACCT CATTAGAACA ACTCGTTGAA
AGTTATTCGG CTTTTGCTAA CCAAGGTAAA GTAAGTCAAT TACGCTTTTT ACAGAAAGAG
TTAACACAAG ATAAGCAAAC ACGTAATTTA CTTTCCTCAG AGAGTGCTTG GGTGGTTCAA
GAGCTCTTAG CTGGCATTGA ACGCCCTGGC AGTATTGATA CTTTTGCCTC GTCTTTACAA
CAAGGAAAGA TGGCATGGAA AACAGGTACA AGTTACGGTT TTCGTGATTC TTGGGCAATC
GGAGTAACCA AAGAATATAC CTTAGGCGTA TGGCTAGGTA GACCCGATGG CACCGCCATG
CCAGGGCACT ATGGCAGTAT TAGTGCAGGG CCGTTATTAT TTAATGTTGC TGACCGTCTT
AATTTGAATG CACAACAGAT CACAAAACCT GACAAGGTAA CGAAAGAGAC AATATGTTGG
CCTTTAGGCA CCAGAAAAAG CGACAACCGA GCGAGTGATT GTCAGGAAGA TCACCAAGCG
TGGATTATTG ACGATACTGT GCCGCCTACT TGGCATACCA GCGATGTAGA TGCATGGCAA
AGTGGACTTT TTACCTTTTG GACTAATCCA GCAAACCAAT TGAGAGTTGC TATGGATTGC
GCGACAGTGC CGAAAAAAGT TAACCATGTT GCTGTTTGGC CTAAGGTATT AGAGCCTTGG
ATTAAGGTAA AACAACGACG ATTTACCTTG ATACCTATGC TTGACCCTAA GTGTGCTAGC
CCAGATATAG CCTCAAGTGC GACCTTAAAA ATTACCGGTA TTGAAGAGGG CAGTATTTAT
CGAAAGTCAG GGGATAAAGG CAAAATACCG AGCGTATGGT TAAAAAGCAT TGGCGGCTTA
GGTACACACA ATTGGTATAT CAACGGCAAA CACAGTTATC AAATCAAGCC AAACCAAGGC
AAAGAGCATT TATTATCAAC CATAGGTAAG CAGCAAATCA TAGTGCAAGA CCAGCAAGGT
AACAGTGATA TGGTTACCCT GTATGTTGAG TAA
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| Protein sequence | MIKQGLTTII RWCKHQRIVV FLALALFMSL AVLFTLDSLY PLNLPEKNNL FARVVVDEND
RPLRSFADKN GIWRYPIKLH QVSPLYIDAL INYEDRWFWH HPGINPFSLL RATMQNVASN
KIVSGGSTLS MQVARILHPH KRSLWGKTKQ VLRTLQLEWQ LDKKQILQLY LNTAPFGGTI
EGVQAASFTY LNKSAKELTH AEAALLAVLP QAPTRYRPDL HALAAQKARN KVLQRLADFD
VWPQEIVDDA MLEQVFSFNF RPKQLAPLLA RRLLNHSNGQ SVVKSTIDSD LQLALQDSLT
SYMTRLPKQS SAAILVVDNK NSAVKAYIGT ADFANAERHG YVDMVQAIRS PGSTLKPFIY
GLALDEGLIH SHSLLADVPR SWGDYRPSNF NGAFNGPVSA AEALKRSLNM PAVDLLERYG
VNRFVAQLEN AGLTLSIPGG KPNLAIILGG AGTSLEQLVE SYSAFANQGK VSQLRFLQKE
LTQDKQTRNL LSSESAWVVQ ELLAGIERPG SIDTFASSLQ QGKMAWKTGT SYGFRDSWAI
GVTKEYTLGV WLGRPDGTAM PGHYGSISAG PLLFNVADRL NLNAQQITKP DKVTKETICW
PLGTRKSDNR ASDCQEDHQA WIIDDTVPPT WHTSDVDAWQ SGLFTFWTNP ANQLRVAMDC
ATVPKKVNHV AVWPKVLEPW IKVKQRRFTL IPMLDPKCAS PDIASSATLK ITGIEEGSIY
RKSGDKGKIP SVWLKSIGGL GTHNWYINGK HSYQIKPNQG KEHLLSTIGK QQIIVQDQQG
NSDMVTLYVE
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