Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3964 |
Symbol | pip2 |
ID | 3520788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4152998 |
End bp | 4153954 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637286410 |
Product | proline iminopeptidase |
Protein accession | YP_270622 |
Protein GI | 71280323 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.290293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGA TGAATCAGTT TTACCCTGAA ATATCCCCGT TTAATGACTT TCTACTTGAT GTTGATGGCC AACATCGAAT TTATGTAGAG CAGTGTGGTA ATCCTAAAGG GCAACCCGTG CTTTTCATTC ATGGTGGTCC AGGAGGCGGT TGTTCAACTA ATGACAGGCG TTTTTTTGAT CCTGAGCAAT ACCATATCAT TTTATTTGAT CAACGTGGCT GTGGTCGTTC ATTACCTCAT GGTTGTCTAG ATAACAACGA AACCAATTTC TTAGTTGCAG ATATAGAAAA GATTCGCCAA CACTTGAATA TTGAACAATG GCATGTGTTT GGTGGTTCGT GGGGCTCTAC GTTATCTTTA GTCTATGCTG AGGCGCATCC GGTCAGTGTT AAAAGTTTAG TCTTACGTGG TATTTTCCTT GGACGTGAGG TTGATACTAA TTGGACATTT TCAGGTGGCG GGGCAACACG TATTTTCCCT GATTATTGGC AAGATTATAT TGATGTACTT CCGCTAGGCA GAGAACAAGC GACGACTAAA GCGGCTTACG AAATGTTGAT TGGTGAGGAT AAAGCCCTAG CGCAAAAAAT AGCAACGGCT TGGAGTATTT GGGAAATCCG TTGCTGTACC TTAATACCTG ATCAAGCCTT TGTTGATGCA GCTACAGGTG ACGACCATGC TTGGACATTA GCTCGCCATG AGGCACACTT TATGGTGAAT GATTGTTTTT TAACTGACAA TCAGATCTTA GCGAACTGCG ATAAAATAAA AGATATTCCA ACGACTATCG TTCATGGTCG TTATGATATT GTTTGTCCTG CTGATAATGC GTGGTTATTA CATCAACAGT TACCTAATTC GCGTCTTGTT ATTAGTGAGG CATCAGGTCA TGCTTCTGTT GAACCAAACA CTAAGCATCA CTTGATTGCG GCAACTCAAT CAATGTTGTC ATTGTAG
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Protein sequence | MNKMNQFYPE ISPFNDFLLD VDGQHRIYVE QCGNPKGQPV LFIHGGPGGG CSTNDRRFFD PEQYHIILFD QRGCGRSLPH GCLDNNETNF LVADIEKIRQ HLNIEQWHVF GGSWGSTLSL VYAEAHPVSV KSLVLRGIFL GREVDTNWTF SGGGATRIFP DYWQDYIDVL PLGREQATTK AAYEMLIGED KALAQKIATA WSIWEIRCCT LIPDQAFVDA ATGDDHAWTL ARHEAHFMVN DCFLTDNQIL ANCDKIKDIP TTIVHGRYDI VCPADNAWLL HQQLPNSRLV ISEASGHASV EPNTKHHLIA ATQSMLSL
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