| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3957 |
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| Symbol | |
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| ID | 3519975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4142226 |
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| End bp | 4144838 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286403 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_270615 |
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| Protein GI | 71279516 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.143097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACTGA GTATTGCTAA GCAAGCCAAT ATGCAATTGG TTATGCGCGC TAATGTTGAG
TATGGAGAAG ATAATAAACG CTATAAAGCG CTAAAGCAGC AATCGAGTTT GGACGATTTA
CTCTCTCAGG TATTAAGAGA TAGCCCATTT AATTATCAGA TTTTAGTGGA TACACACGTC
ATCCTTATTC TTCCTAAGAC AGTTGTTGCC CCTGAAAATA GCGATGCTTT AGAGGTTAAT
CGTGTATGGG AGCATATTTT GGTGACGGGG CATGGAAGTG AAAATAGAAA CCTATTATCT
TCTTCTACTT CGGTAAGCTA TATAAGTAGC GGTACCTTAC AGCAGTTATC TAATGAAAAT
ACTGCAGAGT TATTACAAAA TGTACCTGGA TTTTGGGTAG AAGGATCTGG CGGCGAAACA
AATAATAATG TTGCACCTCG TGGGTTAAGG GGAGGTGAGG GCTTTCGATT TATCAGCCTG
ATGGAAGATG GCATCCCTAT TGTTTATGAT GGTGTTTGGC CAGATTTTTT TCTGCGACAA
GATTTAATGA CTCAGGGAAT AGAAACAATA CGTGGCGGAA GTAGCGGTAT TTTTACATTT
AATGGACCTG CTGCGATTGT AAATTTTATT ACGGCTAAAG GGACTGAAAA ACAAGTTAAT
CGACTTAAGC TTAGTCAGGG GCTTGATCAT CACTTTACTC GGCTTGATGG CTTAACAAGT
GGCGCCATTA ATGAGCAATG GTTTTATGCG TTTGGTGGCT TTTATCGGCA AAGTGACGGT
GTACGTGAAC CCGGTTATAC GGCAGATCAG GGCGGTCAAT TTAAGGTTAA CCTTACGCGA
AAGACTAAAG CTGCTGAAAT GAATTTTTCC TATCGATTTT TGGATGACAA AACCAGTTTT
TTCTCACCCA CACCTATGAC CAATGCTAAT TCCCCACAAG GTGTTACAGG CATAGATGCT
AGCTATGGCA CTTTACTCAG TGCCGACTTT AATAACCTTA CCTTTAAAAG CCCCGAAGGT
TCTTTTCAAC GTGACATTGA AGATGGTCAA CAAAGTAAAT TACACCGCTT TAATGCCAGT
ATTGATTGGG ATGTAGCAGA AAAGATCTTA CTTAAAAATA AGTTCAGTGT TGCTGATATG
GAAAACACCA TGTATGCCTT AATTAATTTG GGTAATGACA CCTTACTTGA TGCAGCTGAG
CGACTTAAAC AAAAGGATAT AACTGATTTT ATTAATCAAC AACAATCACA AGGGGCAACC
CAACCTGCTT ATGTTTATAG TCACAGTCAA CAAATAATTT CAAATCCTGC TGACTTAAAC
TCTAATGGAT TAATCACTAC CGCGTACCCT CTATATTCAC ATTATCAGCA AAAACAATGG
CTAAATCATT TTAGTGTCAA TGTAGATTTA GATGAAGTGC AAGTCAGCTT AGGACATATG
TTCGCCTACA ATGATTTTGG CAGTTTACCT CTCGATAAAT GGCAAGGGGA AATCCTAACC
GAAGTAAAAG ACCAGCCACG TCGTTTAGAT ATTGTCGCAC TTGATGATCG CGATAATGTT
GTTGCTAGTT TCAGTGAACA AGGTTTCACC TCGTATGCGG GGCCGGGTTA TTTAGATGGA
GAAGGGGAAG CTATATCTAA TTCTATTTAT GGTTACCTTG AATGGCAGCC TATAACGCCA
TTACTTTTAG ACTTTGGGTT ACGTTGGGAG CACTTATCAT TAACATCAAC CGCGGGTACT
GATAGTGTTT ATGCATTAGC GGATAGTAAT TTTGATGCGG TATACAAGAG CGGTTACACT
TTTACTAAAA ATGATGACTT TAACAAGCTT GCATGGAATT TAGGTGGTAA TTATCAGTTA
TCACCATTAT CTGCAATATT TTTTCATTTA TCGAGTGGCT TTGAAATGCC GAAGCTAATT
AATTTTGGCA ATGAGATAGG TTGGGGGGAT TATCAAGACA CTATCCCAGA AGAAGCTGGT
TTTGGTGACC CCGTTGAATT AACCTTTGCT GAAGGTGGCG TACGTTTAGC TGACAATAAT
TGGCGTATAA CGGCTGCATT ATTTGAAACT CGCTTTAATC CATTACCCTT TACCGTATTT
CGTGGCATTT ATGATCGCCA ACAAAGTATT TTTATTGATA CTAAAACTAG AGGTATTGAA
TTTGACTTTA CTGTTAATTT AACCAAGCAG CTAACCGTTG CAGGCCTAGG CGTTTGGCAA
AAAGCTGTAC TTAGTGGCAT TCCCAGTGAT GCGATTGAAA GTGCATATAA TGGTAATCAA
ATTACTCGAA CGCCTGAATT CCAATTACGT ATTAGTCCGA GTTACACTAT AGATAAGGCG
AGGTTTTTTT TAACCTACGC TTATATAGGG AAACGCTATT CAGATATTGC TAATAATTTT
TCGTTAGCGG CTTACTCTGT TATCGATTTA GGTTTTACTT ACCAACTTAC CAAGCAGTTT
AGCTTTGCGC TACACGGTAA AAATATAACC AACAGTGTTG GATTAACTGA AGGTAACCCT
CGAAATGCAT TAGCGCACCG TAATAGTACT AATTTTTACG CGAGAGCTAT CTTTGGCCGT
TCGGTAATAG CCAGTGTGGA AGTAACGTTT TAA
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| Protein sequence | MLLSIAKQAN MQLVMRANVE YGEDNKRYKA LKQQSSLDDL LSQVLRDSPF NYQILVDTHV
ILILPKTVVA PENSDALEVN RVWEHILVTG HGSENRNLLS SSTSVSYISS GTLQQLSNEN
TAELLQNVPG FWVEGSGGET NNNVAPRGLR GGEGFRFISL MEDGIPIVYD GVWPDFFLRQ
DLMTQGIETI RGGSSGIFTF NGPAAIVNFI TAKGTEKQVN RLKLSQGLDH HFTRLDGLTS
GAINEQWFYA FGGFYRQSDG VREPGYTADQ GGQFKVNLTR KTKAAEMNFS YRFLDDKTSF
FSPTPMTNAN SPQGVTGIDA SYGTLLSADF NNLTFKSPEG SFQRDIEDGQ QSKLHRFNAS
IDWDVAEKIL LKNKFSVADM ENTMYALINL GNDTLLDAAE RLKQKDITDF INQQQSQGAT
QPAYVYSHSQ QIISNPADLN SNGLITTAYP LYSHYQQKQW LNHFSVNVDL DEVQVSLGHM
FAYNDFGSLP LDKWQGEILT EVKDQPRRLD IVALDDRDNV VASFSEQGFT SYAGPGYLDG
EGEAISNSIY GYLEWQPITP LLLDFGLRWE HLSLTSTAGT DSVYALADSN FDAVYKSGYT
FTKNDDFNKL AWNLGGNYQL SPLSAIFFHL SSGFEMPKLI NFGNEIGWGD YQDTIPEEAG
FGDPVELTFA EGGVRLADNN WRITAALFET RFNPLPFTVF RGIYDRQQSI FIDTKTRGIE
FDFTVNLTKQ LTVAGLGVWQ KAVLSGIPSD AIESAYNGNQ ITRTPEFQLR ISPSYTIDKA
RFFLTYAYIG KRYSDIANNF SLAAYSVIDL GFTYQLTKQF SFALHGKNIT NSVGLTEGNP
RNALAHRNST NFYARAIFGR SVIASVEVTF
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