| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3916 |
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| Symbol | |
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| ID | 3522805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4091132 |
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| End bp | 4091890 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286362 |
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| Product | putative lipoprotein |
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| Protein accession | YP_270574 |
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| Protein GI | 71282332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAT TGACAGTAAA AATTATTTTG ACCGTTCTAG CATTGGCCTT AACTGGTTGT
TCCTCTTCTG AAAACGATAT AGACAAGGTA CCAGATAAAT CTGCACAGTC TCTATTTGTT
GATGCTCGGA CAGCCCTAGA TAATGGGTTA TACCAAAAAG CTATTCAAAT ACTTGGCGCT
ATAGATTCTC GCTTTCCTTT TGGCCCTATT TCACATCAAG TACAACTTGA TTTGATTTAT
GCTTATTATA AAAGCGGTGA TGCTGCACAA GGCATTGCGT TAGCCGATAG GTTTTTACGT
TTAAATCCCA ATAACTCCAA TATTGATTAC GTTTATTACA TGCGTGCACT TATCAATATA
TCTACTGAAG AGAACCTATT CCAAGATTTG GCGGGAATAG ATCGTTCCGA TCGTGATCCT
GAGGCTTCAC GCAGTGCTTT CAATGATTTT AAGAGCATAG TCACTGATTA CCCAGACAGT
AAGTATGCTG CAGATTCACG TAAACGCATG ATTTCAATAA AATCTCGCCT TGCGCAATAT
GAAATTGCTG TTGCTAAATA TTATGTGAAA CGTGAAGCTT ATGCTTCCGC TGCTAACCGT
GCTCGCTACG TAGTTGAATA CTTTTCGCCA AGCCCGGAAA TAGAGCAAGC ATTAGAGATT
ATGATTAATT GTTACGATAA GTTGGGTCTA GCAGATTTGA AGAAAAATGC GCTGCAAGTA
CTTGCCGCTA ACTACCCAAA TAACAAACTA ATGAACTAG
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| Protein sequence | MDKLTVKIIL TVLALALTGC SSSENDIDKV PDKSAQSLFV DARTALDNGL YQKAIQILGA
IDSRFPFGPI SHQVQLDLIY AYYKSGDAAQ GIALADRFLR LNPNNSNIDY VYYMRALINI
STEENLFQDL AGIDRSDRDP EASRSAFNDF KSIVTDYPDS KYAADSRKRM ISIKSRLAQY
EIAVAKYYVK REAYASAANR ARYVVEYFSP SPEIEQALEI MINCYDKLGL ADLKKNALQV
LAANYPNNKL MN
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