| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3914 |
|---|
| Symbol | |
|---|
| ID | 3521689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 4089118 |
|---|
| End bp | 4090002 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637286360 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_270572 |
|---|
| Protein GI | 71281218 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGA CGAATACTAG TCATAGTAAA CGGGCTCATT TTACCAACGC TACTGTTGAG
TTGGTAAAAT GGCCTTTTAA TTCATCATAT TCTCTCGATG ATAAAGTCCT CGCGTTACAA
ACAACACGTC TTTCCCCTCA GTTATCGCTA AATTCATCAT TAACCCCATC GTTAAACGAA
CAAGTTTCAT CAGCTTTTGG TGACTTTAAT TTAGGTATGC ATGTTGGTGA TAACGCAGAG
CGAGTTACCT ACAATCGCAA TGTGTTAAAC CGTTTTATTA GCCAGCAGCT CTTCAATAAG
ACGGTAAAGT CAAATACACA ACTAATTGAT GAAGTAAAAA TTCAGTGGCT AGAGCAAGTT
CATGGTAATG AGGTAGTGAC AATCACTAGC GTAGATGAAC AAGCTAGGGT TGCTGATGCC
AGCATTACTA GCCAAAAAAA TATAGTTTTG GCTATAATGA CAGCAGACTG CTTACCAATA
CTTTTAAGTC ATAAAACGGG CAGTGAAGTT GCCGCAATCC ATGGCGGTTG GCGTCCGCTA
GTTGCAAATA TTATTGCTAA AACAATAGCA AAGATGAATA GTCAGCCCTC TGATATTGTT
GCTTGGCTTG GTCCATGTAT TGGTAAGAAT GCTTTTGAAG TAGGTAGCGA AGTAAAACTA
GCATTTACTC AACTAGACGT TGCTTTTGCT AATGCTTTTG TAAAGCAAGC CAATGGAAAA
TACCTAGCCG ATTTACATCA AATTGCCCGA CTACAGTTGG TCTCTTTAGG AGTCACTGTA
ATTAATAGTC TTGCAGAGTG TACCTACCAA GAAACAGAAA AATATTATTC ATATAGAAGA
AAGAAAATAA CGGGTCGTAT GGCGAGTCTT ATTTGTAGAC GTTAA
|
|---|
| Protein sequence | MLKTNTSHSK RAHFTNATVE LVKWPFNSSY SLDDKVLALQ TTRLSPQLSL NSSLTPSLNE
QVSSAFGDFN LGMHVGDNAE RVTYNRNVLN RFISQQLFNK TVKSNTQLID EVKIQWLEQV
HGNEVVTITS VDEQARVADA SITSQKNIVL AIMTADCLPI LLSHKTGSEV AAIHGGWRPL
VANIIAKTIA KMNSQPSDIV AWLGPCIGKN AFEVGSEVKL AFTQLDVAFA NAFVKQANGK
YLADLHQIAR LQLVSLGVTV INSLAECTYQ ETEKYYSYRR KKITGRMASL ICRR
|
|---|
| |