Gene CPS_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3896 
SymbolhisI 
ID3520851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4068250 
End bp4068870 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content40% 
IMG OID637286342 
Productphosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_270558 
Protein GI71280385 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTAA CTAACGATAA TATAAATGAT TTGGCATGGC AGAAAATGGA TAATCTTATT 
CCTGCAATTA TTCAGCATGC CGCTACAGGT GCAATTTTAA TGCAAGGTTA TATGAACCAA
GCCTCTTTAC AAGCAACCCT AACAACGGGA AAGGCAACGT TCTTTAGCCG CTCAAAACAA
GCACTATGGG TTAAAGGTGA AACTTCTGGC AACTTCCTAG AAGTGAAACA AGTGTTAACT
GATTGCGACA ACGATAGTTT ACTTATTGCT TGTGAACCCA TTGGTCCAAG TTGTCACCTA
GGAACCGAAT CTTGTTTCCC TGAGCAAAAG CTTACTCAAC AAAACTTTCT TAGCCAACTT
GAGCAAGTCA TTCAACAACG CAAAGATGAT GATCCTAAAG AGAGTTACAC TGCTCATTTA
TTCTCTCGCG GTACTACTAA AATGGCTCAA AAAGTAGGTG AAGAAGGTGT TGAAGTAGCA
CTTGCTGCTG TCGCTGAAAC CAAAGAAGAC TTACTGGGGG AATGTGCAGA TTTGTTCTAT
CACACCCTGG TATTACTCGC TGATCAAAAA ATAGAACTCA GTGAGGTTAT GGAAGTGTTG
CAAACACGTC ATAACAAGTA G
 
Protein sequence
MLVTNDNIND LAWQKMDNLI PAIIQHAATG AILMQGYMNQ ASLQATLTTG KATFFSRSKQ 
ALWVKGETSG NFLEVKQVLT DCDNDSLLIA CEPIGPSCHL GTESCFPEQK LTQQNFLSQL
EQVIQQRKDD DPKESYTAHL FSRGTTKMAQ KVGEEGVEVA LAAVAETKED LLGECADLFY
HTLVLLADQK IELSEVMEVL QTRHNK