| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3893 |
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| Symbol | hisH |
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| ID | 3522399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4066021 |
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| End bp | 4066698 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286339 |
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| Product | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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| Protein accession | YP_270555 |
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| Protein GI | 71281927 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0118] Glutamine amidotransferase |
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| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.166968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTCAG CAAAAAATGT CATTGTAGAT ACCGGCTGTG CTAATTTATC ATCTGTTAAG
TTTGCCGTTG AGAGACTTGG CTTTGAGGTT ACTATCACTG ATGATATAAC GATAATCCAA
CAAGCTGAAA AAGTTATATT CCCAGGTGTT GGTAGCGCTA AGCATGCCAT GAAAAACATT
AAAGCTAAAA ATTTAGAGGC TGCTTTGCAA GGGTTAACTC AGCCTGTACT TGGCTTTTGT
TTAGGCATGC AGTTAATGAC TGAGTCTTCA ACCGAAGGTA AAAAATCCTC AACTGAAGGT
AATAATGATG ACAATACTAG TCACATAGTC CCTTGCTTAA ATTTGATCCC AACAAACGTT
GAACCATTAA AAGCACAAGG AAATAGATTG CCACATATGG GCTGGAATAC GCTCACTCAA
GTAAGCAATC ATCCTATTTT TAAGGGAATA TCTGAAGGCG ATTACTTTTA TTTTGTGCAT
AGCTTCGCAG CGCCAATCAG TGAATACACC ATTGCCAGTT GTGAGTACGG CAGTACTTTT
TCTGCTGCTA TTGCGAAAGA TAACTTTATC GGTTGTCAAT TTCACCCTGA ACGCTCTAGT
GCATTAGGCA GTAAAATAAT TCAAAACTTT CTCGAGTTAG ACTCTACAGA ACTTAATCAG
GAGCTTGTAA ACTTATGA
|
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| Protein sequence | MTSAKNVIVD TGCANLSSVK FAVERLGFEV TITDDITIIQ QAEKVIFPGV GSAKHAMKNI
KAKNLEAALQ GLTQPVLGFC LGMQLMTESS TEGKKSSTEG NNDDNTSHIV PCLNLIPTNV
EPLKAQGNRL PHMGWNTLTQ VSNHPIFKGI SEGDYFYFVH SFAAPISEYT IASCEYGSTF
SAAIAKDNFI GCQFHPERSS ALGSKIIQNF LELDSTELNQ ELVNL
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