| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3883 |
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| Symbol | |
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| ID | 3520460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4055352 |
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| End bp | 4057031 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286329 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_270545 |
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| Protein GI | 71279997 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGC CACTACCAGA TAAGTTCATC ATGTCGATGA ATCGCGTTTC TAAAGTAGTC
CCACCCAAGC GCACTATTTT AAAAGATATA TCACTTTCAT TTTTCCCTGG CGCTAAAATC
GGTGTATTAG GTTTAAATGG CTCGGGTAAA TCTACCTTGC TTCGTATTAT GGCGGGTGTT
GATACTGAAT TTGAAGGTGA TGCGGTTGCT TTAGCGGGAA CTAAAATTGG TTATTTACCA
CAAGAACCTC AACTTGATGA AAATCAAACA GTACGTGAAG CCGTTGAAGA AGCTGTTTCT
GAAGTTAAAA ACGCTATGGC CCGTTTAGAC CAAGTCTATA ACGAATATGC TGAAGAAAAC
GCTGACTTTG ACGCCCTAGC AAAAGAACAA GGCGATCTCG AAGATATCAT TAATGCACAA
GATGGTCATA ATATTGATAA CGTTTTAGAA CGTGCTGCTG ATGCATTACG TTTACCAGAA
TGGGATCAAA AAATTGCCGT ACTAAGTGGT GGTGAACGAC GTCGTGTTGC ACTTTGCCGC
TTATTACTTG AAAAACCAGA CATGTTATTA CTCGATGAGC CAACCAACCA TTTGGATGCT
GAATCTGTTG CATGGTTAGA GCGCTTCCTG CATGACTACC CTGGGACTGT AGTAGCTATC
ACCCATGATA GATATTTCTT AGATAACGTT GCTGGTTGGA TATTAGAGCT TGATAGAGGC
CATGGTATTC CTTATGAAGG CAATTACTCA TCGTGGTTAG AGCAAAAAGA TGCACGTCTT
GAACGAGAAG GTAAAACCGA AAGTGCATTA CAAAAAACCA TTAAGCAAGA ACTTGAATGG
GTTCGTTCAA ATCCAAAAGC GCGTCAATCA AAAAGCAAAG CCCGTTTGGC ACGTTTTGAA
GAGCTTAATA GCCAAGATCA TCAAAAACGT AACGAGACTA ACGAGCTTTA CATTCCACCT
GGACCTCGTT TAGGCGATAA GGTACTTGAT GTTAATAACT TAACCAAATC ATTTGGCGAT
AGAGTACTTA TTGATGACTT AAGCTTTAGT GTTCCTAAAG GTGCTATTGT CGGTATTATT
GGTCCAAACG GTGCAGGTAA ATCTACACTC TTTAAAATGA TGTCTGGTGC TGAAAAACCT
GACTCTGGAA ATGTAGTGCT GGGTGATACG GTTAAGCTTG CTAGTGTTGA TCAGTTCCGT
GATGACATGG ATAACAGCAA AACCGTTTAT CAAGAAATCT CTCAAGGTCA TGACATTTTA
CAAATTGGTA ATTTTGAAAT TCCGAGTCGT GCCTATGTTA GTCGCTTTAA CTTTAAAGGT
AACGATCAAC AAAAAATCAT TGGTGAGCTA TCCGGTGGTG AACGTAACCG AGTTCATTTA
GCCAAGCTTG TACAAACGGG TGGTAACGTA TTACTGCTCG ATGAGCCAAC CAACGATTTA
GATGTTGAAA CTCTACGTGC GCTTGAAGAA GCATTATTAG AGTTCCCTGG TTGTGCCATG
GTTATTTCAC ATGACCGTTG GTTCCTTGAT CGCATTGCTA CTCACATCTT AGATTACCGT
GATGAAGGTC AAATCAACTT CTTTGAAGGT AATTTTACTG ATTATGAGGC ATGGTTGAAG
AAAACTTTAG GCCCTGCAGC AACAGAACCA CACAGAATTA AATACAAAAA AATAGGGTAA
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| Protein sequence | MAQPLPDKFI MSMNRVSKVV PPKRTILKDI SLSFFPGAKI GVLGLNGSGK STLLRIMAGV
DTEFEGDAVA LAGTKIGYLP QEPQLDENQT VREAVEEAVS EVKNAMARLD QVYNEYAEEN
ADFDALAKEQ GDLEDIINAQ DGHNIDNVLE RAADALRLPE WDQKIAVLSG GERRRVALCR
LLLEKPDMLL LDEPTNHLDA ESVAWLERFL HDYPGTVVAI THDRYFLDNV AGWILELDRG
HGIPYEGNYS SWLEQKDARL EREGKTESAL QKTIKQELEW VRSNPKARQS KSKARLARFE
ELNSQDHQKR NETNELYIPP GPRLGDKVLD VNNLTKSFGD RVLIDDLSFS VPKGAIVGII
GPNGAGKSTL FKMMSGAEKP DSGNVVLGDT VKLASVDQFR DDMDNSKTVY QEISQGHDIL
QIGNFEIPSR AYVSRFNFKG NDQQKIIGEL SGGERNRVHL AKLVQTGGNV LLLDEPTNDL
DVETLRALEE ALLEFPGCAM VISHDRWFLD RIATHILDYR DEGQINFFEG NFTDYEAWLK
KTLGPAATEP HRIKYKKIG
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