Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3874 |
Symbol | pgk |
ID | 3521105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4046986 |
End bp | 4048161 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286320 |
Product | phosphoglycerate kinase |
Protein accession | YP_270536 |
Protein GI | 71280637 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATTA TCAAAATGGC TGATCTAACA TTAGCCAACC AACGCGTATT AATTCGTGAA GATTTAAATG TACCTGTAAC CGATGGTAAA ATCACTTCAG ATGCTCGTTT ACGCGCTGCA TTACCTACAC TTAAACTTGC ACTAGAAGCT GGCGCAAAAG TTATGGTTAT GTCTCATTTA GGTCGTCCAA CTGAAGGACA ACCTGAAGAG AAATTTTCAC TTAAACCTGT AACTGATTAT TTAAGTGCAG CATTAAACTA CCCTGTTCGC TTAGTCACTG ATTACCTAGA CGGTGTAGAT GTTGCTGCTG GTGAATTAGT CGTATTTGAA AACATTCGCT TTAACCTGGG TGAAAAGAAA AATGATGACA CGCTAGCTAA AAAGTTAGCT GCATTATGTG ATGTTTTCGT TATGGATGCT TTTGGTACTG CTCATCGTGC CCAAGCCAGT ACTCATGGCG TAGCCAAATT TGCCGCGACT GCTTGTGCTG GTCCATTGCT TTCTGGTGAA TTAGAAGCAT TAGGTAAGGC TTTAGATAAT CCTGCAAGAC CACTTGTGGC AATTGTTGGT GGCTCTAAAG TATCAACTAA ATTAACTGTG CTTGATTCTT TAGCAGGCAT TGTTGATCAA CTTGTTGTTG GCGGTGGTAT TGCTAACACC TTTATTGCAG CAGATGGTCA TAACGTCGGA AAATCATTAT ATGAAGCTGA TTTAGTTGAA GAGGCAACTC GTTTAACTAA ACAAGCGAAA GCAAACAACG GTGATATCCC AGTACCTAGT GATGTTGTTG TTGCCACTGA GTTTTCAGCT TCTGCAACTG CAACCTTAAA ACCGGTCAAT GAAGTCACTG CTGATGAAAT GATTTTTGAC ATTGGTCCTG AGACAGCAAA AGCGTTAACT GAAATTATCG CTAACGCTGG TACCATAGTT TGGAATGGCC CTGTTGGCGT ATTTGAATTT GATCAGTTCG GTGAAGGTAC TAAGGTGATT GCACAAGCTA TTGCTGATAG TTCAGCCTTC TCAATTGCTG GTGGTGGTGA TACTTTAGCC GCTGTTGATA AATATGAAAT TGCCGATAAA ATTTCTTACA TCTCAACAGG TGGTGGAGCG TTCTTAGAAT TCTTAGAAGG CAAGAAATTA CCAGCAGTAG AAATATTAGA GCAACGCGCT AAATAA
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Protein sequence | MSIIKMADLT LANQRVLIRE DLNVPVTDGK ITSDARLRAA LPTLKLALEA GAKVMVMSHL GRPTEGQPEE KFSLKPVTDY LSAALNYPVR LVTDYLDGVD VAAGELVVFE NIRFNLGEKK NDDTLAKKLA ALCDVFVMDA FGTAHRAQAS THGVAKFAAT ACAGPLLSGE LEALGKALDN PARPLVAIVG GSKVSTKLTV LDSLAGIVDQ LVVGGGIANT FIAADGHNVG KSLYEADLVE EATRLTKQAK ANNGDIPVPS DVVVATEFSA SATATLKPVN EVTADEMIFD IGPETAKALT EIIANAGTIV WNGPVGVFEF DQFGEGTKVI AQAIADSSAF SIAGGGDTLA AVDKYEIADK ISYISTGGGA FLEFLEGKKL PAVEILEQRA K
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