| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3860 |
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| Symbol | |
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| ID | 3520864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4026757 |
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| End bp | 4028316 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286306 |
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| Product | BCCT family transporter |
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| Protein accession | YP_270522 |
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| Protein GI | 71280398 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.99321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTT CTAAAGCTAT TGCGGAAGAG AGCGAGGTTA AAATGCCTAA AATCAAATTC
CTAGAAGGGG TAGATATACC CGTATTTTTG ATCAGTGGTG GCGCGCTTGT GCTATTTTGT
ATCCTCGCAT TGTACGATAT CAAAATGGTG TCTAACTGGG TTAATTCAAC CTTTGCAGCA
TCAACTAAAA TCTTTGGCGC TTACTGGCAA GTACTCCTGC TCCTGACTTT TGTTATTGGG
ATCTTTATGG CGGTAAGTCG AACTGGTGGC GTTGTGTTAG GGGGACTAAA GTCGCCTGAG
ATGTCGACCT TTAAATGGAT TTCTATCATC ATGTGTACGC TACTTGCGGG TGGCGGTGTC
TTTTGGGCTG CTGCTGAGCC AATGGCGCAT TTTACTTCCC CATCTCCTTA TTTTGGTGGG
GAAACAGGAA CAACTGAAGC GGCTTATAAT GCGTTAGCAC AAAGCTTTAT GCATTGGGGC
TTTTTAGCTT GGGCCATTCT AGGTAGTTTG ACTGGCGTAG TGCTTATGTA TTTGCATTAT
GAAAAGGGCT TACCGTTAAA ACCGCGTACT TTACTTTATC CTGTTTTTGG TGACAAGGTA
ATGAAAGGTG CTTTTGGTAC TCTGGTTGAC TCTTGTTGTG TACTCGCTGT AGTGGCAGGT
ACGGTTGGAC CTATTGGTTT CCTTGGTTTA CAGGTAAGCT TTGGCTTAGA AAAACTGTTT
GGTATTCCTG ATACCTACGT AACACAAGTA TCCATATTAG TTGGTCTTAT TTGTATCTAT
ACTATTTCTG CTGTGAGTGG TGTTACTAAA GGCATCCAAC TTTTAAGTAG TATCAATATT
ATTTTAGCAA TTTTCTTAAT GGCATTTATT TTAATATTTG GCCCTACTGC TTTTATCTTT
GACAGTTACT TGCACTCTTT TGGTCTTTAC CTAAATAACT TTATTCCAAT GGCGACTTAT
CGTGCAAATA CTGCATGGCT TGACTGGTGG ACTGTGTTCT TTTGGGGATG GTTCTTAGGT
TACGGTCCGT TAATGGCGAT GTTTGTTGCG CGTATCTCTC GCGGTCGTAC TATCCGTCAG
ATGATCTTAA CTATTTCAGT GGTTGCGCCG GTTATCACCT GTTTTTGGTT CACTATTGTA
GGTGGCAGTG GTTTAGCGTT TGAGTTAGCG ACACCAGGTG TTATTTCAGA ACCTTTCACT
GGTTTTAATT TACCAGCAGC ATTACTGGCT ATTACAGAGC AGTTGCCATT TGGTTGGATA
ATATCATTCT TGTTCTTGAT ATTAACGACT ATCTTTGTAG CGACTACGGG CGATTCAATG
ACATTCTCAG TATCTATGGT AATGACTGGT ACTGATTCAC CACAGAGTTC TTTACGTGTG
TTCTGGGGCG TTATGATGGG GGTTATGGCA GCTTTGCTTA TCTCTATTGG CTCAGGTGGT
ATATCGGCAT TGCAATCCTT TATTGTAGTA ACGGCAGTAC CTGTATCCCT GGTCTTATTA
CCGTCCTTAT GGAATGCACC GCAAATTGCT CGCAAGATGG CTGACGAGCA AGGGTTATAA
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| Protein sequence | MNTSKAIAEE SEVKMPKIKF LEGVDIPVFL ISGGALVLFC ILALYDIKMV SNWVNSTFAA
STKIFGAYWQ VLLLLTFVIG IFMAVSRTGG VVLGGLKSPE MSTFKWISII MCTLLAGGGV
FWAAAEPMAH FTSPSPYFGG ETGTTEAAYN ALAQSFMHWG FLAWAILGSL TGVVLMYLHY
EKGLPLKPRT LLYPVFGDKV MKGAFGTLVD SCCVLAVVAG TVGPIGFLGL QVSFGLEKLF
GIPDTYVTQV SILVGLICIY TISAVSGVTK GIQLLSSINI ILAIFLMAFI LIFGPTAFIF
DSYLHSFGLY LNNFIPMATY RANTAWLDWW TVFFWGWFLG YGPLMAMFVA RISRGRTIRQ
MILTISVVAP VITCFWFTIV GGSGLAFELA TPGVISEPFT GFNLPAALLA ITEQLPFGWI
ISFLFLILTT IFVATTGDSM TFSVSMVMTG TDSPQSSLRV FWGVMMGVMA ALLISIGSGG
ISALQSFIVV TAVPVSLVLL PSLWNAPQIA RKMADEQGL
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