| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3852 |
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| Symbol | |
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| ID | 3518593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4020443 |
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| End bp | 4021012 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286298 |
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| Product | sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_270514 |
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| Protein GI | 71278823 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTGAAA GAAGCGATGA AACGCTCATA GCGCAAGCGC TAAAAGGTAA AAAATCTGCA
TGGTTAACGC TGGTAAAGCG TTATGAGAAA AATCTCTATA ACTACGCTTT ACGCATGGTG
AATAATCCAG CAGATGCCAT GGATTTGATG CAAGATATTT TCATCGCATT ATTTCGAAAT
TTATCTAAAT TTCGCGGTGA ATGTCCTTTT AAGAATTGGC TATTTAAAAT TGCTCATTAT
CGTTGTCTCG AATATTACCG ACGAAAACGG CCGATGCAAT CACTTGATGA TGTGCCAGAG
CAAGAGGATG AAGAGTCAGT CTGTCTAGAG AAAAACTTAC AAATTCAGCA ACAAAGTAGT
GCTTTGTTAG AGGCTATGCA GCATTTACCC GTTAAACAGA AATTAGTCGT TGAGTTAAAG
TTTTTTCAAC AATGCACTTT CGAAGATATT AGCCAGCAGT TAGGTATTTC AACCAATACA
GCAAAGTCAC AACTGTATAG CGCACTCGAC AAATTAAAGC TGCACTTAGT CGATGATCAA
ATTATCAAGG TAGGGGTGGA GTATGTCTAA
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| Protein sequence | MFERSDETLI AQALKGKKSA WLTLVKRYEK NLYNYALRMV NNPADAMDLM QDIFIALFRN
LSKFRGECPF KNWLFKIAHY RCLEYYRRKR PMQSLDDVPE QEDEESVCLE KNLQIQQQSS
ALLEAMQHLP VKQKLVVELK FFQQCTFEDI SQQLGISTNT AKSQLYSALD KLKLHLVDDQ
IIKVGVEYV
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