Gene CPS_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3848 
Symbol 
ID3521889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4017528 
End bp4018001 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content38% 
IMG OID637286294 
Productpeptidyl-prolyl cis-trans isomerase, FKBP-type 
Protein accessionYP_270510 
Protein GI71281417 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT TTATATTATT AGCGATTGTT ATTGCTATTG TTGTGTTCAG CTTGATGCGA 
TCAAATAACA ACAAAAAAGC GGCCCAGTTA AATGCAACTT TAGGCAGTGA TTTTCTTGTG
TCTAATAAGA GTGAAGAAGG GGTATTAGAA ACAGCTTCTG GCTTGCAATA CAAAGTGCTA
ACTGAAGGCA GTGGCACTGA GCACCCAAGT GCTTCTTCAA AAGTTACAGT GCATTATCAC
GGGACTTTAC TCAATGGAAA AGTATTTGAT AGCTCGGTAG ATAGAGGTGA GCCAATTGGC
TTTGGTTTAC AGCAAGTCAT CAAAGGTTGG ACTGAAGGTG TTCAGTTGAT GGTTGTTGGT
GAAAAAACAC GTTTTTATAT TCCATCAAAT TTAGCTTATG GCGATAGTGC GGCAGGAAAA
ATAGCGCCAG GTTCATTATT AATTTTTGAT GTTGAATTGT TAGCGATAAA CTAA
 
Protein sequence
MSKFILLAIV IAIVVFSLMR SNNNKKAAQL NATLGSDFLV SNKSEEGVLE TASGLQYKVL 
TEGSGTEHPS ASSKVTVHYH GTLLNGKVFD SSVDRGEPIG FGLQQVIKGW TEGVQLMVVG
EKTRFYIPSN LAYGDSAAGK IAPGSLLIFD VELLAIN