| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3846 |
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| Symbol | gcvP2 |
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| ID | 3522032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4013294 |
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| End bp | 4016164 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286292 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_270508 |
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| Protein GI | 71281560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACA ATAATTTATT AGCACAACTG AATGATAACT TAGATTTTAT CAGTCGACAT
AATGGCCCTG ATCGAACCCA ACAACAGCAT ATGTTAGACA CGCTGAAAGT AGACTCTATC
GAACAAATGA TCGATAAAAC AGTACCCGAT AATATTCGCC TTTTGCAGCC AATGGCATTA
GCAAAACCGC AAAGCGAAAT TGAAATGTTA GCTACACTCA AAGGTATAGC GTCAAAAAAC
AAAGTAAACA GAAGTTATAT TGGACAAGGG TATTATGATA CCCATGTCCC TCACGTTATT
TTACGTAATG TCTTCGAAAA CCCTGGCTGG TATACCGCTT ATACGCCTTA TCAGCCAGAA
ATTTCACAAG GTCGTTTAGA AGCACTGCTT AATTTTCAAC AAATGATCAC AGATCTTACC
GCAATGGAAT TATCCAATGC GTCTTTGCTA GATGAAGCCA CTGCAGCTGC AGAAGCAATG
AGCTTATGTA AGCGTGCCAG TAAAAATAAA AGTAATGTCT TTTTTGTTAG TGACGATGTT
CACCCGCAAA CATTAGACGT CATCAATACC CGAGCAAAGT ATTTCTCTTT TGAGGTTGTG
GTAGCCCCCT GCTCAGAACT AGAAAATCAT GATGTGTTTG GCGCTTTGTT GCAATATCCC
GGCACAACAG GACAAGTACA TAATTTAGAA AAAATCATAG AACAAGCCCA TAGCAAAAAA
ACCTTAGTTG CAGTTGCCGC TGACTTACTG GCGTTAACCG TACTTAAAGC CCCTGGCGAA
ATGGGCGCGG ATGTTGTTAT AGGTAGTGCT CAACGCTTTG GCGTTCCAAT GGGTTACGGT
GGTCCACATG CTGCATTCAT GGCCACTAAA GAAAAGTATA AACGTACCAT CCCTGGTCGA
GTTATTGGTG TTTCAATTGA CTCAAAGGGT AAACCTGCTT TACGTATGGC GATGCAAACT
CGAGAACAAC ATATTAGGCG AGAAAAAGCC AATTCGAATA TTTGTACCGC GCAAGCATTA
CTTGCCAATA TGGCATCATT TTATGCCGTA TATCATGGCC CGCAAGGGTT GCGAAAAATG
GGTCGACGCG TGAATCGTTT AACATCAGTG CTCGCTGCAG GTTTGCAAAA AGCAGGTATT
GAACTGGTCC ATAATGATTT CTTCGATACG ATTACCCTAC AAACAAATGA AAAAACTGAT
GCTATTTATC AACGCGCATT AGCTGCAGAC CTTAATTTGC GCTTATTACC TGATCAACTT
GGTATCAGTT TAGATGAAAC CACAACGTCT GCTGACGTTG AAGCATTATG GTTAGCCATT
ACTGAACAAT CTTTTAACGT CGATGATATT GAACAAACAC TAAGTGCAGA GTTTTGTAAC
ATACCTGCAG ATTGTCAGCG TACTAGTGAG TATTTAAGTC ACCCAGTGTT TAATAGTTAT
CACAGTGAAA CACGTATGTT GCGTTATTTA AAAAGTCTTG AAAATAAAGA CTTTTCATTA
ACTCACGGCA TGATACCGCT GGGCTCTTGT ACAATGAAAC TCAATGCTAC CGCGCAAATG
ATCCCTGTTA CCTGGCCTGA ATTTTCACGC ATGCACCCTT TTGCACCAAG CGATCAATGT
ACAGGATATG AAACCTTAGC TGAAAGCTTT AGCGACATGC TAATAGAAAT CACTGGATAT
GACGCTTTTT CATTACAGCC AAACTCTGGT GCGCAAGGTG AATATGCCGG ACTTATCGCC
ATTCAACGTT ACCACGCCTC TCGCGGTGAA GATTATCGAA ATATCTGCTT AATTCCTAGC
TCTGCACACG GTACTAACCC TGCCAGTGCT TCCATGGTAT CAATGCGTAT TGTGCTGGTT
AATTGTGATA AAGAAGGCAA TGTTGACCTA GATGATTTGA AGGAAAAAAT AAACCTTCAT
CGTGATCAAC TCTCTGCAAT GATGATCACT TATCCTTCAA CACATGGCGT TTATGAAGAA
AGCATCAAAG AAATTTGCGA GCTTATTCAC GAAGCTGGTG GTCAAGTTTA TCTTGATGGT
GCCAATATGA ATGCTCAAGT AGGGTTAACT TCGCCTGGTT TCATTGGCGC TGATGTCTCT
CATCTCAACC TACATAAAAC ATTTTGTATT CCGCACGGCG GCGGTGGCCC AGGTATGGGA
CCTATAGGTG TTAAATCACA CTTAGCCGAC TTTTTGCCAG GGCACAGTGT TACTAATACA
GTAGGCGCAG TATCAGCAAC CGCACTAGGT AGTGCTTCTA TTTTACCTAT TTCTTGGGCC
TACATTGCTT TAATGGGCGC TGAAGGACTA AAATCAGCCA CTGAGCTCGC TATTTTAAAT
GCTAACTACA TTATGGAAAA ACTCAGCCCG CACTACCCTA TATTATTCAG AGGTAAGCAA
GGACGTGTTG CTCATGAATG TATTATTGAC CTCAGACCAT TGAAAGAGTC TTCCGGTATC
AGTGAAGAAG ATGTTGCGAA ACGTTTAATG GATTTTGGCT TTCATGCACC AACCATGTCA
TTTCCTGTCG CTGGCACCTT GATGATTGAA CCAACTGAGA GTGAGTCTTT AGAAGAATTA
GATAAATTTA TTGATGCACT GATTACGATT CGCCATGAAA TAGCGAAAGT TGAAGAGGGA
ACTTGGACAC TTGCCGATAA CCCACTAGTC AATGCACCTC ACACATTAAA CGATCTGACC
GGTAGTGACT GGCCTCGTGC TTATTCACGC TTAACCGCTT GTTATCCGAG TAGTTGTCCG
AGCCAACCAA AATTTTGGCC AACAACTAAC CGTATTGACA ATGTCTACGG GGATCGAAAC
CTAATTTGTA GCTGTCCTCC GATTGAGAGC TACCAATCAA CTGATACATA A
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| Protein sequence | MTNNNLLAQL NDNLDFISRH NGPDRTQQQH MLDTLKVDSI EQMIDKTVPD NIRLLQPMAL
AKPQSEIEML ATLKGIASKN KVNRSYIGQG YYDTHVPHVI LRNVFENPGW YTAYTPYQPE
ISQGRLEALL NFQQMITDLT AMELSNASLL DEATAAAEAM SLCKRASKNK SNVFFVSDDV
HPQTLDVINT RAKYFSFEVV VAPCSELENH DVFGALLQYP GTTGQVHNLE KIIEQAHSKK
TLVAVAADLL ALTVLKAPGE MGADVVIGSA QRFGVPMGYG GPHAAFMATK EKYKRTIPGR
VIGVSIDSKG KPALRMAMQT REQHIRREKA NSNICTAQAL LANMASFYAV YHGPQGLRKM
GRRVNRLTSV LAAGLQKAGI ELVHNDFFDT ITLQTNEKTD AIYQRALAAD LNLRLLPDQL
GISLDETTTS ADVEALWLAI TEQSFNVDDI EQTLSAEFCN IPADCQRTSE YLSHPVFNSY
HSETRMLRYL KSLENKDFSL THGMIPLGSC TMKLNATAQM IPVTWPEFSR MHPFAPSDQC
TGYETLAESF SDMLIEITGY DAFSLQPNSG AQGEYAGLIA IQRYHASRGE DYRNICLIPS
SAHGTNPASA SMVSMRIVLV NCDKEGNVDL DDLKEKINLH RDQLSAMMIT YPSTHGVYEE
SIKEICELIH EAGGQVYLDG ANMNAQVGLT SPGFIGADVS HLNLHKTFCI PHGGGGPGMG
PIGVKSHLAD FLPGHSVTNT VGAVSATALG SASILPISWA YIALMGAEGL KSATELAILN
ANYIMEKLSP HYPILFRGKQ GRVAHECIID LRPLKESSGI SEEDVAKRLM DFGFHAPTMS
FPVAGTLMIE PTESESLEEL DKFIDALITI RHEIAKVEEG TWTLADNPLV NAPHTLNDLT
GSDWPRAYSR LTACYPSSCP SQPKFWPTTN RIDNVYGDRN LICSCPPIES YQSTDT
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