| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3842 |
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| Symbol | |
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| ID | 3521675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4008712 |
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| End bp | 4010094 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286288 |
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| Product | amino acid/cation symporter |
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| Protein accession | YP_270504 |
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| Protein GI | 71281204 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.489392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TAACGGGTTT AATTTCCAGT CTCAATAGCT TGGTTTGGGG CGTCCCAATG
CTAGTTATGA TACTTGGTGT TGGTTTATTC TTAATGGTCG GTTTACGATT TATGCCAATC
CTTAAGTTAG GTACAGGCTT TAGATTACTT TGGACTGGCC GTATCCCAGA TGAAGATAAA
AGTGCAAAAG GTGAAATAAG CCCTTTTAAT GCATTAATGA CCTCACTATC TGCAACTATC
GGTACTGGTA ATATCGCAGG TGTTGCAACT GCTATATTCC TAGGTGGCCC AGGTGCTCTA
TTTTGGATGT GGTGTACTGC CTTAGTAGGT ATGGCAACTA AATTCGCTGA AGCGGTACTT
GCTGTACGCT ATCGTGAAGT AGATGCTAAC GGAAACCACA TTGGTGGTCC GATGTACTAC
ATCAAAAATG GTTTATCAAG CAGATGGGGT TGGTTAGGTG GTGCATTCGC ACTCTTCGGT
TCTATCGCCG CTTTTGGTAT TGGTAACACA GTACAATCAA ACTCAGTTGC CAATGCACTT
GAAAGTAGCT TTGGTGTTCC GCCTGTTGCT ACCGGTATTA TCTTAATGGT ACTTGTAGGT
TTAGTGCTTA TGGGTGGTAT TAAACGTATT GGTGATGTTG CTGGTAAACT TGTTCCTCTA
ATGGCAATCT TCTACATCAG TTGTGGTATT GTTGTGTTGA TGGTACATGC CGCTGAACTT
CCTGCTGCTA TCGCTCTAAT TTTTGAAAGT GCATTTACAG AAACTGCTGC TGAAGGTGGA
TTCGCCGGTG CTGCTGTTTG GGCTGCTATT CGTTTCGGTG TGGCTCGTGG TGTATTCTCA
AATGAAGCTG GTCTAGGTAG TGCTCCTATC GCTCATGCCG CGGCTAAAAC TAATAACCCT
GTAGCTCAAG GCCTTGTTGG CATGTTAGGT ACGTTCATTG ATACATTAGT TGTTTGTTCA
ATTACTGGTT TAGCTATTGT AGTTTCTGGT GAGTGGACAT CTGGTTCAAC GGGTGCTGAA
TTAACATCCA ATGCTTTCGC CACAGCGATC CCATATGGTA ACTACATTGT AGCTATTGCT
CTTACTGTTT TTGCATTTAC AACTATCCTA GGTTGGAGTG TATACGGTGA GAAATGTGTA
CAGTACTTCT TTGGTGTTAA AGCGATTATG CCTTTCCGTA TTCTTTGGAT TTTAGTAGTA
CCTGTTGGCG CTATTGGTTC ATTAGAATTC ATCTGGTTAC TTGCTGATAC AATGAACGCG
TTAATGGCAA TTCCTAACTT AATCGCACTA GTATTACTAA GTCCGATAGT GATTAAATTA
ACCCGCGAAT ATTTTGTTAG CGGCGGCAAA GCTCCTGCTG AAATGACAAA ACAAGCAGAC
TAA
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| Protein sequence | MEFLTGLISS LNSLVWGVPM LVMILGVGLF LMVGLRFMPI LKLGTGFRLL WTGRIPDEDK
SAKGEISPFN ALMTSLSATI GTGNIAGVAT AIFLGGPGAL FWMWCTALVG MATKFAEAVL
AVRYREVDAN GNHIGGPMYY IKNGLSSRWG WLGGAFALFG SIAAFGIGNT VQSNSVANAL
ESSFGVPPVA TGIILMVLVG LVLMGGIKRI GDVAGKLVPL MAIFYISCGI VVLMVHAAEL
PAAIALIFES AFTETAAEGG FAGAAVWAAI RFGVARGVFS NEAGLGSAPI AHAAAKTNNP
VAQGLVGMLG TFIDTLVVCS ITGLAIVVSG EWTSGSTGAE LTSNAFATAI PYGNYIVAIA
LTVFAFTTIL GWSVYGEKCV QYFFGVKAIM PFRILWILVV PVGAIGSLEF IWLLADTMNA
LMAIPNLIAL VLLSPIVIKL TREYFVSGGK APAEMTKQAD
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