Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3822 |
Symbol | |
ID | 3520423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3989861 |
End bp | 3990355 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637286269 |
Product | putative thioredoxin |
Protein accession | YP_270485 |
Protein GI | 71279960 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.644902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCATA TTTTTAGAAC GATGTTTTTT GTTTTTGTTA GCCTTATTAT TGGGGCAAGT TTTACGGTAA ACGCAAATGA AACAGCTAAA CCTTGGCAAT TAAAAACTCA AAATGGCGAA GTGATTAGTT TAGAGCAGTA TAAAAACAAG CCAGTCATTT TACATTTTTG GGCAACTTGG TGTCCTTATT GTAAAAAACT ACAACCGACG TTAGTTGCCT TGCAGAAAAA ATATCAAGCA CAAGGTGTAG AACTCATCTC AATTAGCTTT AATGAAGACG AGGGTGCAAA GCCTCAAGAT GAAATTAATC GCAGAGGTTA CTCTTTTTTA ACAGGAGTAA TGGGGGAAGA GGTTGCTAAA CTTTATGGCG TTAGAGGAAC ACCAACAACA TTTTTCATTA ATCGTAAAAA TGAAATAATT TGGAAAACAT CAAGTTCAGA CAAAGCTGAT CCTCGTTTTG ATCTAGCGCT ACAAGAAATA ATTAAAAATA ATTGA
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Protein sequence | MNHIFRTMFF VFVSLIIGAS FTVNANETAK PWQLKTQNGE VISLEQYKNK PVILHFWATW CPYCKKLQPT LVALQKKYQA QGVELISISF NEDEGAKPQD EINRRGYSFL TGVMGEEVAK LYGVRGTPTT FFINRKNEII WKTSSSDKAD PRFDLALQEI IKNN
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