Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3820 |
Symbol | dnaJ |
ID | 3522644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3986369 |
End bp | 3987505 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637286267 |
Product | chaperone protein DnaJ |
Protein accession | YP_270483 |
Protein GI | 71282171 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAAAC GTGATTATTA TGAAACATTA GGGGTTAGCC AAGACGCCTC TGAGAAAGAA GTTAAAAAAG CCTATAAAAA ATTAGCAATG AAATATCACC CAGACCGTAC TCAAGGTGAT AAGTCTAAAG AAGAAACGTT TAAAGAAGTT AAAGAGGCCT ATGAAATCCT CAATGACGAC CAAAAGCGTG CTGCTTACGA CCAGTATGGT CATGCTGCTT TTGAACAAGG TGGTAACGGT GGCGGCGGCG GTGGTCATGG TGGTGGATTT GGTCAAGACT TCGGCGATAT TTTTGGTGAT ATTTTTGGAG GCGGCGGCGG TGGTCGTGGA CGTCAGCGTC AGCAACGTGG TTCAGATTTA CGTTATAACG TAGATTTATC ACTTGAAGAT GCGGTTAAGG GTAAAAGCTT AGAAATTAAA GTACCGACGT ATGTTAGCTG TGAACCTTGT GATGGCTCTG GAGCTAAGAA AGGCACTTCA GCTAAAACAT GTAGCACTTG TCATGGCCAC GGCCAAGTAC AAATGCGTCA AGGGTTATTT GCTGTTCAGC AAACGTGTCC TACTTGTAGT GGCAAGGGTA AAGTTATTGC TGATAAGTGT ACTTCATGTC GTGGTCAAGG GCGTGTGGAG AAAACGAAAA CGTTATCAGT TAAAATTCCA GCGGGCGTTG ATACTGGCGA TAGAATTCGT TTATCAGGTG AAGGTGAAGC CGGAGAACAT GGCGCACCAG CAGGCGATTT ATATGTACAA GTAAATGTAC GAGACCACGA AATATTTGTT CGTGATGAAA ATCACTTATA TTGTGAAGTG CCTATTAGCT TTGTTACTGC TGCCTTAGGT GGTGATATTG AAGTACCGAC GCTTGGTGGT AAAGTTAAGC TGAAAGTGCC TAAAGAAACA CAAACAGGTA AGATGTTCCG TTTGCGTGGT AAAGGCGTTA AGTCTGTACG TAGTTCTACT ACCGGTGATT TGATGTGTAA AGTCGTTATT GAAACGCCTG TTAACTTATC AGGTGATCAG GCTGACTTAT TACGTCAATT AGAAGAAAAA ATGGCGAGTA GCAGCAAGAA ACACAGTCCA AAAGAAACCG GTTTTTTTGA CGGTGTTAAG AAATTTTTTG ATGATCTTAA AAGCTAG
|
Protein sequence | MSKRDYYETL GVSQDASEKE VKKAYKKLAM KYHPDRTQGD KSKEETFKEV KEAYEILNDD QKRAAYDQYG HAAFEQGGNG GGGGGHGGGF GQDFGDIFGD IFGGGGGGRG RQRQQRGSDL RYNVDLSLED AVKGKSLEIK VPTYVSCEPC DGSGAKKGTS AKTCSTCHGH GQVQMRQGLF AVQQTCPTCS GKGKVIADKC TSCRGQGRVE KTKTLSVKIP AGVDTGDRIR LSGEGEAGEH GAPAGDLYVQ VNVRDHEIFV RDENHLYCEV PISFVTAALG GDIEVPTLGG KVKLKVPKET QTGKMFRLRG KGVKSVRSST TGDLMCKVVI ETPVNLSGDQ ADLLRQLEEK MASSSKKHSP KETGFFDGVK KFFDDLKS
|
| |