| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3816 |
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| Symbol | |
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| ID | 3521578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3980842 |
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| End bp | 3982359 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286263 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_270479 |
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| Protein GI | 71281109 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.19533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGC ATTTGACATC TTTCCCCGTA TTATTGCCGA TGTTGGCAGC GGTTATTTTA
TTAATGCCGC CCTGCGGTAA AAGTATAGCT ATCAGAAGAG TTGCCTCGGT CGTATTAAGT
ATAATTACCT TTTTAGCATC GTTGGCTTTG TTATTAAAAG TTCAAGTTGA CGGTACGCAA
GTTTATGCAA TCGGCGATTG GAGTGCCCCT TTTGGTATTG TTTTAGTAGC CGACCCTTTA
TCTACTTTGT TAGCTTGCTT AACCGCACTA CTTGGTATTG TATGTGTTTT ATATGCATGT
GCAGGAGATG ATGATAAAGG CAGTTTCTTC CATCCACTGG TACATTTTCT AGTTTTAGGG
GTAAATGGCG CATTTTTAAC GGGTGATGCT TTTAATCTAT TTGTATTTTT TGAAGTATTG
CTCATTGCCT CGTATTCATT ACTAATGCAC GGTGGAGATA AAAAGAATAC CCGTGCGGCT
TTACAATATG TGATTATGAA CCTTGTTGGC TCGGCGGTTT TCTTGATTGC GCTGGGTATT
CTATATGGGG TCTTAGGGAC TCTGAACATG GCTGACATGG CTCAGAAAGT TGCACTTTTA
CAAGGTGATG ATGTTTACCT AGCTAAAATA GGTGGCTTGT TGCTGTTGGT GGTTTTTGCT
TTAAAAGGCG CCTTGTTACC GCTACATTTA TGGCTACCGA ATACTTACGC TACAGCGATG
CCTATTGTCG CTGCATTATT TGCAATAATG ACAAAAGTTG GCGTGTACTC AATGATGCGT
GTTTATACGT TAATCTTTGG CGATGAAGCC GGTGAATTGA GTCATATGGC GCAAAGTTGG
TTGTGGTGGT TAGCACTCGC TACTATTGCT ATGGGTACCA TAGGGGTTAT AGCAAGTAAG
GATTTAAGGA AATTAGCCGC CAATTTAGTG ATTGTGTCGG TGGGAACCTT AGTCGCTTTA
GTTGCTGTTC AAACCGTTGA GGCCAGCTCT GCAGCTATTT ATTACTTAGT CCACTCAACG
TTGGTCACTG CAGCACTATT CATCTTAGCT GACTTAATTG GTCGTCAAAG GGGGAACGTT
GCTGATCGCA TTACTGCTGG TCCTCCACTC ACTCAACCAA GGCTTCTTGG TGTTTGCTTT
TTGATTGCCG GTATTGCGGT GATAGGCATG CCACCATTGT CTGGTTTCAT TGGTAAAGTA
TGGCTGCTTA AAGCTACATT AAATGCTGAA TATACCTTTG TATTTTGGCC ACTTTATTTA
CTGGCAAGTC TTGCGATTCT GATTGGTGTG TCTAAAGCAG GCAGCACTGT GTTTTGGCAT
CATCAAGTTC AAGCGACAGA GAATATAGGG CAAGAGCGCG TTCATCCAGC GCAGCTAGTA
GCATTGATTA TTCTTATTTC GGGAGCACCA TTGATGAGCT TTTTTGCTGG ACCTTTAAGT
GAGTATGCAA TTGATGCAGC TACCCAGTTA CATGATTTTA ATCACAACAT TAAAGTTATC
CTTTCAGGAG GTCAGTAA
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| Protein sequence | MIQHLTSFPV LLPMLAAVIL LMPPCGKSIA IRRVASVVLS IITFLASLAL LLKVQVDGTQ
VYAIGDWSAP FGIVLVADPL STLLACLTAL LGIVCVLYAC AGDDDKGSFF HPLVHFLVLG
VNGAFLTGDA FNLFVFFEVL LIASYSLLMH GGDKKNTRAA LQYVIMNLVG SAVFLIALGI
LYGVLGTLNM ADMAQKVALL QGDDVYLAKI GGLLLLVVFA LKGALLPLHL WLPNTYATAM
PIVAALFAIM TKVGVYSMMR VYTLIFGDEA GELSHMAQSW LWWLALATIA MGTIGVIASK
DLRKLAANLV IVSVGTLVAL VAVQTVEASS AAIYYLVHST LVTAALFILA DLIGRQRGNV
ADRITAGPPL TQPRLLGVCF LIAGIAVIGM PPLSGFIGKV WLLKATLNAE YTFVFWPLYL
LASLAILIGV SKAGSTVFWH HQVQATENIG QERVHPAQLV ALIILISGAP LMSFFAGPLS
EYAIDAATQL HDFNHNIKVI LSGGQ
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