| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3780 |
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| Symbol | ppiD |
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| ID | 3519488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3943939 |
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| End bp | 3945855 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286227 |
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| Product | peptidyl-prolyl cis-trans isomerase D |
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| Protein accession | YP_270447 |
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| Protein GI | 71278179 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.986864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAG ATATTCGTGA AAAATCGCAG GGATTAACTG CCAAAATTAT TCTTGGTTTG
ATTATCCTAA CCTTCGCTGT TGCAGGTGTT GGAAGTTATA CCAACTCAGT TGATACTTCA
GTAGCAACGG TAAATGGTGA ACCAATTAGC CAACAAGCAT TTAATAAAGC TTATCAAGCA
CAGCGTGGTC GTATGGCGCA ACAGTTTGGT GAAATGTTTG ATACCTTATC AAATGATGCT
AATTATATGG CTAACTTTCG TCAGGGCGTT TTAGATAACC TAATTAATGA AAAATTAATT
GATCAAAACA GTGAAGCGCT TGCTATTCGT GTTTCTGATC TTCGTTTGAA AGAAACTATC
CGCAAGATGC CTGAATTCCA AGTTGACGGT ACTTTTGATA ACAATCGCTA TTTAGCCATT
ATTAATCAAG CTGGTTTCTT CCAATCATCA GACTTTCGTG ATTATTTACG CGTTGAAATG
ACTCGTCGTC AGTTAAGCCA GGCATTAATT GCTACTGAGT TTAACTTGCC TTATCAAGAG
AAATTACAAC TTGCGTTGCA AAACCAAACG CGTGATATCC GATTCGCTAC AATTTCTGCA
GAGCAGTTTA AAGCAACTGT TGAATTAACG GATGAAGAAG TGAACAGCTA CTACCTAGCT
AATCAAGCTC GCTTTCAAAA CAAAGAACAA GTTAAAGTTG ACTATATCAG TTTAAATGTT
GCTAACATTG CCAAAGGTAT TAATGTTACT GATGAAGAAG TCGCTAAGTA TTATCAAGAA
AATTCAGCGA GTTTTACTGA ATCTGCTCAG CGTCGAATCT CTCATATCCT TATTGAATTT
AATGACGGCA ATGCTGATGA TGAAGCAGCG AAAATACAAG CACAAGCAGT ACTAGCTCGT
CTTGAACAAG GTGAAGATTT TGCCGTACTT GCCAAAGAAG TATCTAATGA TACCTTTAGC
GGTGAAAATG GTGGTGATCT AGAGTGGTTA GAACCAGGTG TAATGGAAGA AACTTTTGAT
GAAGCAGCGT TAGCCTTGGT TAATGTTGGT GATACTAGCC AATTAGTTAA AACTAGCTTT
GGTTATCACG TACTGAAATT AACTGATTAT AAAGAAGAAG TGGTAAAAGC TTTAATTGAT
GTACAGACTG AATTACGTAG TAAATTAAGT AATGATCAAG CACAAGAAAA ATTCTTTACT
TTACAGCAAG AAATGGCCCG TATTAGCTTT GAATTTCCTG ATAGCCTAGA AGATGCTGCA
GCAGAGGTAA ATGTTACTAT ACAAACGTCT CCTTGGTTAT TACGTGGTGG TAACAGTGCT
CCTTTTGATC AAGCTAAAGC TGTTGAAGCC GCTTTTTCAG ATATAGTTTT ACAAGACAAC
ATGAACTCTG ATCTAATTGA AGTTAATGAT GATGTTGCCC TTGTTCTACG CCTTAATACT
TTCCAAGAAG CTAACGTTAA GCCTTTATCT GAAGTTGAAG CACAAATTAA AGATATTATA
GTTAACCAAA AAGCGACTGA AAAGGCTCAA CAGACAGTTG ATTCATTACT CGCTGATTTT
AATGCAGGCA CCGATATTTC TACGCAACTA ACAGCACTAA ACACAAGTTT TGTTAGCAAA
GAGAAAGTTG CCCGTTATAG CCCTGAAATT GACCAAAGTA TTAGTCGTGC AGCCTTTGTT
TTACCACACC CAGTTAGTGG TGTTATATCG GCGTCAACAG TTGCGTTGAG TAATGGTGAC
CTTGCTCTTA TTGAAGTTAC AGCAGTGGAT GTGAACGACG TTGCGGCTAC TCCTAACTTA
GCTCAGCAAC AAACTTCCCA GCTAGCGCAG TCAGCTTATC AAAGCTTTGT AAACTCATTA
AAAGTGGGTG CTAAAATTAC ACGTAAGCAA GTTGCTGAGC CAGTAACTGC TTATTAA
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| Protein sequence | MLEDIREKSQ GLTAKIILGL IILTFAVAGV GSYTNSVDTS VATVNGEPIS QQAFNKAYQA
QRGRMAQQFG EMFDTLSNDA NYMANFRQGV LDNLINEKLI DQNSEALAIR VSDLRLKETI
RKMPEFQVDG TFDNNRYLAI INQAGFFQSS DFRDYLRVEM TRRQLSQALI ATEFNLPYQE
KLQLALQNQT RDIRFATISA EQFKATVELT DEEVNSYYLA NQARFQNKEQ VKVDYISLNV
ANIAKGINVT DEEVAKYYQE NSASFTESAQ RRISHILIEF NDGNADDEAA KIQAQAVLAR
LEQGEDFAVL AKEVSNDTFS GENGGDLEWL EPGVMEETFD EAALALVNVG DTSQLVKTSF
GYHVLKLTDY KEEVVKALID VQTELRSKLS NDQAQEKFFT LQQEMARISF EFPDSLEDAA
AEVNVTIQTS PWLLRGGNSA PFDQAKAVEA AFSDIVLQDN MNSDLIEVND DVALVLRLNT
FQEANVKPLS EVEAQIKDII VNQKATEKAQ QTVDSLLADF NAGTDISTQL TALNTSFVSK
EKVARYSPEI DQSISRAAFV LPHPVSGVIS ASTVALSNGD LALIEVTAVD VNDVAATPNL
AQQQTSQLAQ SAYQSFVNSL KVGAKITRKQ VAEPVTAY
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