| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3772 |
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| Symbol | pspA1 |
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| ID | 3518856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3936276 |
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| End bp | 3936941 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286219 |
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| Product | phage shock protein A |
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| Protein accession | YP_270439 |
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| Protein GI | 71278522 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCAAGATT CACCGACATT ATTAATTCTA ATATTAATAA TTTATTAGAT
AAAGCTGAAG ATCCAGCAAA AATGGTACGC TTGATCATTC AAGAGATGGA AGATACCTTA
GTTGAAGTGC GTTCTAGCTC AGCAAAGACA TTGGCAGATA AAAAGGAATT AGCTCGCCAA
GTGAGCCGTC TTGAGCAAGA TGCTGAGCAA TGGCAAGCAA AAGCTGAATT GGCTTTGAGT
AAAGATCGAG AAGACCTAGC TCGTGCTGCT TTAATGGAAA AGAAAAAGAG CAGTGAAAGT
GCACAAGCGT TAGTCGATGA GTTAGCACAT ACCAATGAAC ATCTTAGCAA ATTACAAGGT
GAAATCTCGC AATTACAAGA TAAGTTGAGC GATGCCAAGG TACGTCAAAA AGCTATTGTT
ATTCGTGAGA AATCTGCGAG CTCTCGTTTA AAAGTAAAAG AAAATATTCA TAGTACTCGT
GTTAATGATG CCCTAAGCCG TTTTGATCAT TATGAGCGTA AAGTTGATGA TATTGAAGCG
GAAATTGAAT CATATGATTT AGGTAGCAAG TCATTGGCAG ATGAAATAGC AGGACTTGAA
TCAGATGAAA TGGTTGATGA TGAATTAGCG CAGTTGAAAG CTAAGATGAA AAACAAGCAA
AAATAA
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| Protein sequence | MGIFSRFTDI INSNINNLLD KAEDPAKMVR LIIQEMEDTL VEVRSSSAKT LADKKELARQ
VSRLEQDAEQ WQAKAELALS KDREDLARAA LMEKKKSSES AQALVDELAH TNEHLSKLQG
EISQLQDKLS DAKVRQKAIV IREKSASSRL KVKENIHSTR VNDALSRFDH YERKVDDIEA
EIESYDLGSK SLADEIAGLE SDEMVDDELA QLKAKMKNKQ K
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