Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3754 |
Symbol | exbB2 |
ID | 3520551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3913612 |
End bp | 3914136 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637286201 |
Product | biopolymer transport exbB protein |
Protein accession | YP_270421 |
Protein GI | 71280088 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTCC TGATAGAGCT TTGGGAATCT GTCAGGGGTT TTATTGCGAC GGGTGGTAAT GTACTTTATG TTGTTGCCTT CGCACTCTTA TTGATGTGGA TTTTGATGAT AGAACGCTAT TGGTTCTTAG CATCAGTCTA CCCAACTATG AGAGATGATA TCATCGCTCG TTGGGATGCA CGCCGAGATA CAACTTCTTG GTATGCACAT CGAATTAGAG AGACTTGGAT CTCCGAAGCA GACGAGTTAC TTGAACAGCG AATGATTACC ATTAGAACCT TAGTGGCAAT GTGTCCTCTT ATCGGCTTAC TGGGAACAGT AACAGGTATG ATTGGCGTAT TTGAAGTTAT GGCTGAACAA GGTACTGGTA ATCCGCGTCT AATGGCCGCT GGTATATCGC AAGCAACTAT CCCGACTATG GCCGGTATGG TAGCTGCATT ATCAGGTGTG TTCTTTAGTT CAAGATTAGA CGCTAAAGTT AAACTAGCAA AGGCTAAACT GGTTGACAGT TTACCTCACC ACTAG
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Protein sequence | MLFLIELWES VRGFIATGGN VLYVVAFALL LMWILMIERY WFLASVYPTM RDDIIARWDA RRDTTSWYAH RIRETWISEA DELLEQRMIT IRTLVAMCPL IGLLGTVTGM IGVFEVMAEQ GTGNPRLMAA GISQATIPTM AGMVAALSGV FFSSRLDAKV KLAKAKLVDS LPHH
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