| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3721 |
|---|
| Symbol | |
|---|
| ID | 3523319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3877686 |
|---|
| End bp | 3878573 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637286168 |
|---|
| Product | putative glycosyl hydrolase |
|---|
| Protein accession | YP_270388 |
|---|
| Protein GI | 71278961 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG5309] Exo-beta-1,3-glucanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.439077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGTA AATACAATAA GTATATGTCA TTGGCAGGTG TGAATTTTTC AAACTTGTCA
GTTGATGAAT TGCGAGCTTT AGCAAGCAAT ATTTTAACTG AGAAAATTCA TGGCATATCT
TTTAGTCCCT ATGTTGAAGG ACAAGGACCG GGTACACAAA TTGAAGCGGA ACAAATATCT
GAGCGTTTAA ACATAATTAA GCCCAATATA AATTGGGTAC GCTCTTTTTC TTGTACAGAA
GGTAATGAAA AAATCCCCGC TATTTCAAAA GCCAATGGCC TTAATACTAT GGTAGGTGTT
TGGTTAGATA GCGATCTAGA AAACAATGAA AAAGAGCTCG CTAATGCCAT TTGTGCTGCA
ACAGAAGGAC ATGTAGATAT TTTGGCGGTA GGCAATGAAG TACTACTGCG TGGTGATTTA
TCGGAAGAGC AATTGTTGGA CTATATCAAT CGCGCCAAAC AAGCCTTGCC GAATGTTGAA
GTGGGTTATG TTGATGCTTA CTTTGAATTT GAAGATTACC CACGGATAGC CGATGCCTGT
GATGTTATTT TAGCCAATTG TTACCCATTC TGGGAAGGCT GCTCAGCGGA TTATGCGTTA
CTTTATATGA AAGATATGTA TCGACGTGCC GTGAAAGCAG GTAAGGGCAA AAGAGTCATT
ATCACCGAAA CCGGTTGGCC TAATGTTGGT ACTGCTGAAA GAGGTGCAGA GCCATCGTAT
GAAAATGCCT TGAAGTATTT TATAAATACT TACTTATGGG CGGAAGAAGA TGGTATCGAA
ATTTTCTATT TTTCATCATT TGATGAAACA TGGAAAGTCG CTGATGAAGG CGATGTAGGT
GCTTATTGGG GACTTTGGGA TAAAGACGGG AAAATGAAAT ATGTTTAA
|
|---|
| Protein sequence | MSSKYNKYMS LAGVNFSNLS VDELRALASN ILTEKIHGIS FSPYVEGQGP GTQIEAEQIS
ERLNIIKPNI NWVRSFSCTE GNEKIPAISK ANGLNTMVGV WLDSDLENNE KELANAICAA
TEGHVDILAV GNEVLLRGDL SEEQLLDYIN RAKQALPNVE VGYVDAYFEF EDYPRIADAC
DVILANCYPF WEGCSADYAL LYMKDMYRRA VKAGKGKRVI ITETGWPNVG TAERGAEPSY
ENALKYFINT YLWAEEDGIE IFYFSSFDET WKVADEGDVG AYWGLWDKDG KMKYV
|
|---|
| |