Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3709 |
Symbol | galR |
ID | 3521856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3859386 |
End bp | 3860387 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286156 |
Product | galactose operon repressor |
Protein accession | YP_270376 |
Protein GI | 71281384 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.536559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAA TATACGAAGT TTCAAAACTT GCTAGAGTCT CTTTAGCAAC CGTTTCTCGT GTGATAAATA AAAGCCCACA AGTTAGCGAT AAAACACGCC AAAAAGTTAT GGATGCGATG GCAGAGCTTG GTTACCGTCC TAATTCTATT GCGCAATCAT TAGCATCAAA CAGAACCAAT AGTGTGGGAA TTTTAGTGTC AGAATTACAT GGTCCATTCT TTGGCCAAAT GATGGCTGGC ATAGAGTCCG AATTAAGAGC GGCGGGCAAA CATGTCATTA TTACCACTGG GCACAGTGAA GAAGATAAAG AGAAAGACGG TATCGAGTTT TTAATTAGCC GAAATTGCGA TGCTATTATT TTGCATGTAG AAGCGGTTAG CGATGAATAC CTCATTGATT TGTGTAAAGG CCACACACCA GTTTATTTAA TGAGTCGGTA CGTCGATGAG ATCAGTGAAA ATTGTATTAG CTTAAATAAT GAATTAGGTG GATATCTTGC CACCCAATCA GTAATAGAAT TAGGTCACTC TGCTATTGCT TATATCGGTG GACCACAATT TAAAGCCGAT TCAAAAGACA GATTAGTAGG TCATAAACGA GCATTAGCAG AAAATAATAT TTCTTTTAAT GACACCTTAT ATTTTGAAGG TGACTTCAAA GAAAAAGGCG GTAGCGACGG TTTAAAATAC TTCAATGAGA GTAATAAAGG ATTTAGTGCA TTAATTTGTG CCAATGATGA AATGGCTTCA GGCGCGATAA CTTATGCCCG AGAGCAAGGA CTTTCTCTAC CTAGAGATCT ATCCATAATA GGCTTTGATA ATATCATTTT TGCACGCCAT ACCTATCCCA AACTAACGAC GATAGACAAT CCGGTAAATT CGATGGGGCA TATGACTGCG AAATTGGTGT TAAAAAATAT TTATCAACAA AAGAATATCT CTATTACTCA CTTCTTTGAG CCGACACTTA TCACTAGAGA TTCCATTATT TCCAAAACTT AG
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Protein sequence | MATIYEVSKL ARVSLATVSR VINKSPQVSD KTRQKVMDAM AELGYRPNSI AQSLASNRTN SVGILVSELH GPFFGQMMAG IESELRAAGK HVIITTGHSE EDKEKDGIEF LISRNCDAII LHVEAVSDEY LIDLCKGHTP VYLMSRYVDE ISENCISLNN ELGGYLATQS VIELGHSAIA YIGGPQFKAD SKDRLVGHKR ALAENNISFN DTLYFEGDFK EKGGSDGLKY FNESNKGFSA LICANDEMAS GAITYAREQG LSLPRDLSII GFDNIIFARH TYPKLTTIDN PVNSMGHMTA KLVLKNIYQQ KNISITHFFE PTLITRDSII SKT
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