| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3707 |
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| Symbol | |
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| ID | 3520789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3856378 |
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| End bp | 3857913 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286154 |
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| Product | sugar:cation symporter family protein |
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| Protein accession | YP_270374 |
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| Protein GI | 71280324 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC TCCCCTTTTA TGAAAAAGTA GGTTACGCCA TGGGCGATGC TGCAGCTAAT
TTAGTTTGGC GCGGTGCTTT AGCTTACTTA GCCGTATTTT ATACTGATAC TTTTGGTTTA
ACCGCTGCCG CTGCCGCCAT GCTATTTTTG GTGGTACGTT TATCAGATGG TGTAACCGAC
ATAATAATGG GTATGATTGG CGATAGAACC AATACTCGTT GGGGAAAGTT TCGCCCTTGG
ATATTATGGT CAACACCTTT TTTAGCCTTG TTTATGGTAC TAAGTTTCAC TACTCCTGAC
TTAAGTTATA GCAACAAACT TATTTATGCT TATGTAACCT ATATCGGTTT GACGCTTGCA
TACACAGTAA ACAACGTACC TTATTCGGCG TTAATGGGCG TGATGACGCC AAGTGATACA
GAGCGTACTA GTTTATCTGG CTTTCGTTTT GCTGGTGCCT TTGCAGGTGG TTTGCTTGTA
ATGGGTTTTC TACCTGACTT AGTTGCCTAT TTTGGTGAGG GTAATGATGC CATAGGTTAT
CAATATAGCA TGTACTTATT TGCCGCAATT TTGATAGCCT TAATGTTAAT TACTTTTGCG
AGTACCAAAG AACGTGTTAC GCCAAACACT GATGAATCAA GTAATTTAAA ATCTGACTTG
CTCGATTTAA GTAAAAACCT ACCTTTTATT GTTCTACCAC TATTAGCGAT GACATTATTC
TTCTATTACC GTGATATTTA TAGCGGCATA TTTTTTGTTA TTATCATGGG CTCCATGTTA
ATTCTCATTA AGAGGTTAAT CAAAAAAACA CCTAAAAACT TAGGTGGTAC TCAAAGAGAT
ATGGTGGACT TACTTACCAA TAAACCTTGG TTAATATTAC TCGGCATTGG TTTTCTAACT
ATGATGTTTA ATGGCATTAA ATACGGCACT ATTGCCTACT ATTTCAAATA CCAAGTGGGT
GATGAACTCA TGGCAGGGAA ATACTTTATT GCCTTATTAC TCGTTTCTAT ATTAGGCGCA
TTATCAACAA GTTATTTATC AAAAAAATTA GGTAAACGAC AATTATTTAT TGTCTCACTT
CTGCTAAGTG GTTTGCTTAC TACTGCTTTT TATTGGGTAC CTAAGGGCAA TGTTAGTGCT
ATTTTTGCTT TAGGTTGTAG TGCTGAATTT TTTGCAGCCA TAATGCCAAC ATTATTCTTT
ACCATGCTAG GTGATTCAGC GGATTACTCT GAATGGAAAA ATGGTCGCCG TGCAACCGGC
CTCATTTATT CTGCTGGAAC GTTCGTGCAA AAAACCGGCG GTGGTTTTGC TGGTGCACTA
GTATTGGTTG TGCTTGCTGG CTATGGCTAT GATGGCATGG ACAAATCAAC TATCGCATCG
TCACTGCCTG GCATGCAATT ATTAATGAGC TGGATTCCAG CTTCCTTTGC CTTTGCTGGC
GCTGCCTTAA TGATTTTTTA CCCGCTAACT TGTAAGCAAA ATCAACAAAT TGGTAATGAA
TTAATCCTAC GTAGAACACC TTTAGCTGCA GCTTAA
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| Protein sequence | MTKLPFYEKV GYAMGDAAAN LVWRGALAYL AVFYTDTFGL TAAAAAMLFL VVRLSDGVTD
IIMGMIGDRT NTRWGKFRPW ILWSTPFLAL FMVLSFTTPD LSYSNKLIYA YVTYIGLTLA
YTVNNVPYSA LMGVMTPSDT ERTSLSGFRF AGAFAGGLLV MGFLPDLVAY FGEGNDAIGY
QYSMYLFAAI LIALMLITFA STKERVTPNT DESSNLKSDL LDLSKNLPFI VLPLLAMTLF
FYYRDIYSGI FFVIIMGSML ILIKRLIKKT PKNLGGTQRD MVDLLTNKPW LILLGIGFLT
MMFNGIKYGT IAYYFKYQVG DELMAGKYFI ALLLVSILGA LSTSYLSKKL GKRQLFIVSL
LLSGLLTTAF YWVPKGNVSA IFALGCSAEF FAAIMPTLFF TMLGDSADYS EWKNGRRATG
LIYSAGTFVQ KTGGGFAGAL VLVVLAGYGY DGMDKSTIAS SLPGMQLLMS WIPASFAFAG
AALMIFYPLT CKQNQQIGNE LILRRTPLAA A
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