| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3698 |
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| Symbol | |
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| ID | 3520243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3845353 |
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| End bp | 3848238 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286146 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_270366 |
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| Protein GI | 71279782 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGACA GTGATGAAAT TGAAATCATT GCCGTAACTG GCATGCTTTC AAGTATTAAA
GAATCGACAA GAATTAAGCG TGATGCTTCT GGTGTCGTTG ATGCTATCTC AGCTGAGGAT
ATTGGTAAAT TTCCTGATAC CAATTTAGCA GAATCTTTAC AACGCATTAC GGGTGTATCA
ATTGATCGTA CTAATGGTGA AGGTAGTAAA GTAACCGTAC GTGGTTTTGG TCCCGACTTT
AATATGGTTA CCCTCAATGG CCGTACAATG CCAGCATCTG GCTTACCTGC TGGTGGTGGT
GTCGCAAATT CACGAGCCTT TGAATTCTCA AATTTAGCAT CTGATGCTGT TAAATCTGTT
TCTGTCTATA AAACAGGTAA AGCTAACATA GCTACTGGTG GTATTGGCGC AGTTATTGAC
ATAGTAACAG GCAAACCCTT AGATAACCCG GGCATGCATG TTAGTGTTGG TGCAAAAGCA
CTCATGGATA CAAGTAACCG TGTAGGTGAT GATGTTACAC CTGAGTTATC CGGTTTATTC
AGCTGGACTG ATGATGATGA GATGTTTGGC GCCTCATTAA CAGTTAATAC ACAAGAACGA
CATAGTTCTA CCTCTGGTGC ATTTGTTAAT CAATGGCGAA CCGGTGCCTT CGATGGCACA
ATCCCACAAG CAGCTGATGA TATTCAATTA AACAATGCAC CTGATATTGG TCAACTTTAT
TCAATGCCAT CAGATTTACG CTACTTTATT ACCGACCAAG AACGTGAGCG TACTAATGCT
CAACTTACCT TACAGTTCAG ACCTGTCGAA TCTTTAACTG CAACGCTTGA TTACACCTAT
TCAAAACAGG ATACTTTTCA GGCACGCGCT GAACAATCTA TTTGGATGGA CACCTACAAA
TCTAGTTTAG GTTTTGACGA TGAAACGACA GCCACTCCAA TCGATTATAA TGAAGATCGT
GGTGATCAAC CCCCACGTGA TTTAGGTTTA GCGCAACAAG AGCTAAACCA AGTAAATGAA
AATGATTCAA TTGGTTTAAA CATTAGTTAC GACGTTAATG ACTATTTTAA CATCACTTTT
GATGGTCATA GCTCAACAGC TGATAGCTCT CCTGATGCAG AATATGGTAG TTGGGTTAAT
GCAGGGTTAG GTGCAAACAT TTCTGCTGGT CAAGGTGTTG ATTTTAGTAA TGACTACCCT
ACTATGCGAG TCGATTTTGA CGATTGTGAC CCAAGAAGAG GTTTAAATTG TAACGGCATA
CTTGATCAAG ATGATGTCGG TACATCAATT CTTGATATGA ACTATGCATC TCAAAAAACC
GATATTAATG AATTTCGCCT GATTGGTGCT TATGAGTTCG AGGAAGGCAG TATCGAATTT
GGTGTTGAGT CTCGTTCTAT GGAGAGTCAT TCTGTACAAA GCTTAACACG GCACACTATG
GGTAACTGGG GTGTTGAAAA CCCTGGCGAG TTACCTGCTG ATTTCTTAAC TCCTGTTAAC
TTCACCAAAG AAATTAATGA TTTTGATAAA AATGGTGCCT TCAATCAAGG TTTCACTGGT
AGTGCTTCAC AAATTGGTGC TTGGGCTGCT GGCGAATATG GCTTTGATTT TGTAGCCAAT
GGAGCGTCCG CAACTAACCG TACTATTAAA GAAGATATTA CCGCCGCATT TTTTCAACTG
GACCTTTCAG GTGAGTTAGG CGGTCGTCCA TATAACATAT CTGCTGGTCT ACGTCTTGAA
AGTACTGACG TCACTTCTTC AGCTAATGTA GCACTACCTA ATGCCGTTGC ATGGGAGGGT
AATAATGACT TTAACGTACG TTTCGGTAAT GGAATGCAAG ACTTCTCTGC CGATGCAAGT
TATGACCATG CATTACCAAG TTTTGATTTT GACATCGAAG TTGTTGATAA TGTTGTAGCG
CGGTTCTCTT TCAGTAAAAC TATTGCTCGA CCTACTTATG ATCAATTAAG TGCAGCCGCT
TCTGATGTTA GCGGACCGAC CGGCCCAACT AGCTTGCCAG GTGTTCAACT AGGTACGGCT
TCTAATGGTA ACCCTGGTTT ATTACCATTA GAGTCAAATA ATATCGATTT ATCTGCTGAA
TGGTACTTTG CAGAGACGAG TTATGTATCG ATTGGTTATT ATGAAAAGCG TGTTAATAAC
TTCGCTGGTC GTCAACCTGT TGAAGAAAAT GTATACGGTT TACGTGATGC AACTGCAGGC
CCTCGTGCTC AAGCGGCCGC TTTAGCGTTA ACTGCATTAG GTGAAGAAAT AACTGATACC
AACTTATTTG CTATGGTTGC TGCAACCGAA AATAATGTTG ATTTCTATTC GATGCCAGCT
GAAGATTTTG AAGTTCAATA TGATGTTTTA CCTAACGGTG AAGATCCCTT AATGGACTTT
ACGGTAACTA AGTTTGTAAA CAATAAAGAA GCTAAAATCG ATGGTTTTGA GTTTGCTGTT
CAACACTTTT TTGGCGAAAC AGGTTTTGGT TTTCAAGCGA ACTACACCAC TGTTAATGGT
GATGTAGGTT TTGATAACAA CGGTGACCCC TCAGTAACTC AGTTTGCCCT AGTGGGTTTA
AGTGATACAG CTAACTTAAT ACTAATGTAT GAAAACGATG ACTTCCAAGC ACGTATTGCT
TATAACTGGC GAGACAAGTT CTTAAATACA CAAGCTCAAT ATATAAATGA GCCTGGTTAT
ACAGAAGAAT ACGCACAGGT AGACTTTAAT GTGGCTTATC AAGTTACTGA ACAGCTATCT
GTCTTCTTCG AAGGTATTAA TATTACTGGT GAAGATACTC GAACTCACGG TCGTACCACA
GCACAATTGT GGAATTTATC AGAGCAAGAA GCACGTTATG CTTTAGGTGG TCGTTATACT
TTCTAA
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| Protein sequence | MKDSDEIEII AVTGMLSSIK ESTRIKRDAS GVVDAISAED IGKFPDTNLA ESLQRITGVS
IDRTNGEGSK VTVRGFGPDF NMVTLNGRTM PASGLPAGGG VANSRAFEFS NLASDAVKSV
SVYKTGKANI ATGGIGAVID IVTGKPLDNP GMHVSVGAKA LMDTSNRVGD DVTPELSGLF
SWTDDDEMFG ASLTVNTQER HSSTSGAFVN QWRTGAFDGT IPQAADDIQL NNAPDIGQLY
SMPSDLRYFI TDQERERTNA QLTLQFRPVE SLTATLDYTY SKQDTFQARA EQSIWMDTYK
SSLGFDDETT ATPIDYNEDR GDQPPRDLGL AQQELNQVNE NDSIGLNISY DVNDYFNITF
DGHSSTADSS PDAEYGSWVN AGLGANISAG QGVDFSNDYP TMRVDFDDCD PRRGLNCNGI
LDQDDVGTSI LDMNYASQKT DINEFRLIGA YEFEEGSIEF GVESRSMESH SVQSLTRHTM
GNWGVENPGE LPADFLTPVN FTKEINDFDK NGAFNQGFTG SASQIGAWAA GEYGFDFVAN
GASATNRTIK EDITAAFFQL DLSGELGGRP YNISAGLRLE STDVTSSANV ALPNAVAWEG
NNDFNVRFGN GMQDFSADAS YDHALPSFDF DIEVVDNVVA RFSFSKTIAR PTYDQLSAAA
SDVSGPTGPT SLPGVQLGTA SNGNPGLLPL ESNNIDLSAE WYFAETSYVS IGYYEKRVNN
FAGRQPVEEN VYGLRDATAG PRAQAAALAL TALGEEITDT NLFAMVAATE NNVDFYSMPA
EDFEVQYDVL PNGEDPLMDF TVTKFVNNKE AKIDGFEFAV QHFFGETGFG FQANYTTVNG
DVGFDNNGDP SVTQFALVGL SDTANLILMY ENDDFQARIA YNWRDKFLNT QAQYINEPGY
TEEYAQVDFN VAYQVTEQLS VFFEGINITG EDTRTHGRTT AQLWNLSEQE ARYALGGRYT
F
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