Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3697 |
Symbol | |
ID | 3518577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3843412 |
End bp | 3844815 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637286145 |
Product | sugar:cation symporter family protein |
Protein accession | YP_270365 |
Protein GI | 71278904 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.455392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA AAATAAAACA GCATCAACTT AACTTAGGCG AGAAAATGGG TTACGCCTGT GGTGATATCG CCTCAAATTT TTATTGGCGG GTCTTTGATG TATTCCTGTT TATCTTTTAT ACCGATGTAT TTGGCCTTTC TCCGGCTGCT GTCGGTACTA TGATGCTGGT TACCCGGCTT ATAGATGCCT TCTCTGATCC ACTGATGGGC GCAATAGCTG ATCGCACTAA AACAAAATTT GGTAAATTCA GACCCTATTT ACTTTGGGGA ATTATCCCTA TGGTGGCCGC AGGCGTACTT ACTTTCACCG TACCCGATGT CAGTGATGGT AATAAGTTAA TTTGGGCTTA CGGCACTTAC ATCTTTATGA TGTTGGCTTA CACCTTCATT AATGTGCCCT ATGGCGCTTT ATTGGGTGTT ATCACCCCTG ATAGCCAACA AAGAACTACG TTAACAAGCT TTCGTTTTAT TGGTGCGTTT TCAGGAGGAA GTCTCGTTGC TTATATGACG CCTGAATTGG TCAATTATTT GGGGCAGGGC AATGAAGCCT TAGGTTGGCA GTATACTATG TTGGTTTATG GTTTAATTGC AGCGGTACTT TTTGTAATTA CCTTCTTATC CACTACTGAG CGTGTTTCCC CGCCGGCAGA GCAAAAAACA CCGGTATTGC AGGATTTAAA AGACTTAACG CAGAATAAAC CTTGGAAAGT CTTGTTTGTT TTAGCCCTTA TTATCATGAT GACCATTTCA TTAAGAGGTA GCACGGGCAC TTTTTATTTT AAATATTACG TTGAACGTCC TGACTTAATT GGCAGCTTTG CCATGGCTTA TATGATTGCG TTAGCCATTG GTGCAGCATC CACGCCCCTA TTAACCAAGT TTGTTGATAA ACGTCGCTTG TTGATGATAT TGATGACTAT TGTTGCGCTA CTTTCGATCA TTTTCTATTT TGTACCAAAC GACAGTATTA CCTTGATGTA CGTTTTACAA ATAATGATTG GTTTAGCATT GGGACCAAAA TCACCGTTAG TTTTTTCTAT GTATGCCGAT ACGGCGGATT ACTCGCAGTG GCGAACAGGA AGACGGGCAA CCGCGATGAT TTTTTCAGCG GCAGCATTTG CTCAAAAGCT TGGCGGTGCC TTGGCTGGGG CTATGATTGG TTGGTTACTC GCCTCTATGG GGTATGTGGC TAATCAAGTA CAAACGGGTG TCTCCCAAGA GGGAATTGTG TTGTTGATGA CTTTGATCCC GGCAATTTTT GCTGCTATTG CCGTACCGTT AATCTACTTT TATCCGTTAG GTGATCAACA ATTAGAAAAA ATTCAGCAGG AATTATTAGC TCAACAAGAC AAATCTAATA CTGATGATGG TCAGCCAGCT ATAACAGGAG CTGTTAATGT CTAA
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Protein sequence | MIKKIKQHQL NLGEKMGYAC GDIASNFYWR VFDVFLFIFY TDVFGLSPAA VGTMMLVTRL IDAFSDPLMG AIADRTKTKF GKFRPYLLWG IIPMVAAGVL TFTVPDVSDG NKLIWAYGTY IFMMLAYTFI NVPYGALLGV ITPDSQQRTT LTSFRFIGAF SGGSLVAYMT PELVNYLGQG NEALGWQYTM LVYGLIAAVL FVITFLSTTE RVSPPAEQKT PVLQDLKDLT QNKPWKVLFV LALIIMMTIS LRGSTGTFYF KYYVERPDLI GSFAMAYMIA LAIGAASTPL LTKFVDKRRL LMILMTIVAL LSIIFYFVPN DSITLMYVLQ IMIGLALGPK SPLVFSMYAD TADYSQWRTG RRATAMIFSA AAFAQKLGGA LAGAMIGWLL ASMGYVANQV QTGVSQEGIV LLMTLIPAIF AAIAVPLIYF YPLGDQQLEK IQQELLAQQD KSNTDDGQPA ITGAVNV
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