| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3670 |
|---|
| Symbol | |
|---|
| ID | 3522796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3812919 |
|---|
| End bp | 3815264 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637286118 |
|---|
| Product | protein kinase domain-containing protein |
|---|
| Protein accession | YP_270338 |
|---|
| Protein GI | 71282323 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.353968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC GTTTTCTGCC CATCTATCAT ACGGGTTGGT TTTATCTACT TTTATTATTC
TGGGGATTTT CCTTTTGGTA TGCTTCTATC GGCGGCCTAA ACCAGATAAA TCTATTAAAT
ATTCAATGGC TAAGCCAACT TGAATCATCT CCTGTTTTAT CAGATAAAAA ACCGACCTTA
AATGCTAATG ACATTTTAAC GTTACATTCC GAGTTCAATG GACAAGATAT AAAATCAGTA
ACAACTCTTT TGTCGTATTA CCCCAATAGT CAGATAACCC TGTTAGGTCA ACAATCAAGC
AGTTTTATGA ATAAACTTGA GGCTTACCTA TCCTCAAAAC CCCGTAACAG TAAGATTGTT
ATTGGCTCAA GCCAAGTTAG CTCTGCATCA CCATTAAAGT CTCAGGCAAC AATGCATTTT
TCACCATTAC TTAATTGGTT TCGCTTTTCG TCAAAAATTG ACACTGAATT GTTGAGTTCA
AAGTACTTTA TTTTTTCACC TTTCTTGCAA AGTAAACGAC AAACTTTTCC GTTGATATGG
CGAAAAGATG GGATGTTATA TCTCACTTTA CCAGGCGAAA TAATAAAACA GCTAAGTTCA
AATACCGAAC TATCCATCAA ACAAGATTGG CAATTGAGTT TACTCACGCA GGTGAATACT
TTAGCTCCTA AAAAATATCC TTTGGGTTTT TTTGGTGAGG TATTTATTTC AGAGAACTTA
CCCAGGGTTA ATCAAATAAA TCAAGAACGT CAAGAAAGAT CGGAGACTGT TTTACCTAAG
TTAAGCTCTG TAAGCCAGTT TATTCAACAA TACTCTTCAA GCGCTAACAC TAACTCTAGG
CCTAACTACA AAGTCATCTT CATTACCGAT AATAACTACT CTCAGGATAA AGTACTCAAA
ACATTACTTG GTAAATTGCT TCAAGAAGAT TATGTTTATC AGAGTCTGGT TATTATTTTA
TTTGCTTGGC TGCTCTTGCT ACTAGGCATT TCCCTAACCT GGTTCATAGG TCAATTATCC
TTAAAGCAGC AATCGATCAG TGTACTTAGT TACGTCGTAT TGCTTTTCAT TTTACAATAT
GTCTTTTTCA ATCAAGGACA ATGGCTTGAA GTTCCCCCGA TAATAATCTC GATAATGGGG
ACATGGCTAT TACTTCTTGC TTATCAAAAA GAATATAAGC TATTTTTAGC TGCACTTAAT
TCCCAAAAAA CGCCTTATAA AGAGACTAAC GAATTTTTAG TACCGCCTAA TTCCACTGTT
GAGTCCAAAG TGAAGTCCAA GATAAGAGCT AAGCTAAAAA GCCTACTAAC TAACAAACGA
GTGAAATCTC CTCAAGTAAA ACACAGCAGC TTTTTACCAG AAGAAAATAC CAATGCAGCG
AGTCATAATC AATTTCCACC GATAAATAAA CCTTCACCCG TATCTGGGAA TGATATTAAA
CAAACATTAG TTATCGTTGA TAACCCAGTA ACAAATACTA TCTCGACAAC TCATCAAACT
AGGGTTGAAA ATTTTGGCCG CTACCAAGTC GAAGGGGTTT TAGGAAAAGG TGCGATGGGC
ATCGTTTATC AAGGCGTTGA TCCTAAAATC AACCGTCATG TAGCTATAAA AACATTACAA
TTAAGTGATG ACATTGATTC GCCTGAATTT GGTGAAGCTA AAGCGCGTTT CTTCAGAGAA
GCGCAAACAG CAGGTGGTTT AAGCCATGCC AATATAGTCA CGATTTATGA CGTAGGTGAA
GATAATCACC TAGGTTACAT CGCTATGGAT TTACTCACAG GCGCGCCATT ATCATTATTT
ACCCAAGCGG ACAAAATACT CCCTACGCCA TTGGTTTATC AGTTATTGAT TCAGATAACT
GATGCGCTAG AATATGCCCA TAATCAAAAT GTTGTTCACC GTGATATCAA ACCCGCTAAT
ATTATTTATG ATGACGATTT GCTCAAAGTT ACGGTTACTG ATTTTGGAAT AGCTTATGTC
AGTGATAACA GTAATACCCG AACAGGTATC ATTATGGGTA GCCCCTATTA TATGTCTCCA
GAACAAATAT TAGGCTTAAA AGTGGATGGT CGCAGCGACA TTTTCAGCTT AGGCGTGACT
TTTTATCAAT TGCTTTGTGG CCACTTACCT TTTGAAGGAG AGTCCATAGC AACGGTGGCC
TATCAAATAA CTAAAGCGAA GGCTATTGCC GTTAATCAAC GCAATACTAA TTTGCCAACA
AGTGCGATGC GTATTTGTAG TAAAGCCATG CATAAAGATA TTGATAAGCG TTTCCAATCA
ATGTCAGAAT TTAAATTGGC ATTAACCAAT GCACTTAAAC GTGATTTTAA GATCACAGCA
AACTAA
|
|---|
| Protein sequence | MIKRFLPIYH TGWFYLLLLF WGFSFWYASI GGLNQINLLN IQWLSQLESS PVLSDKKPTL
NANDILTLHS EFNGQDIKSV TTLLSYYPNS QITLLGQQSS SFMNKLEAYL SSKPRNSKIV
IGSSQVSSAS PLKSQATMHF SPLLNWFRFS SKIDTELLSS KYFIFSPFLQ SKRQTFPLIW
RKDGMLYLTL PGEIIKQLSS NTELSIKQDW QLSLLTQVNT LAPKKYPLGF FGEVFISENL
PRVNQINQER QERSETVLPK LSSVSQFIQQ YSSSANTNSR PNYKVIFITD NNYSQDKVLK
TLLGKLLQED YVYQSLVIIL FAWLLLLLGI SLTWFIGQLS LKQQSISVLS YVVLLFILQY
VFFNQGQWLE VPPIIISIMG TWLLLLAYQK EYKLFLAALN SQKTPYKETN EFLVPPNSTV
ESKVKSKIRA KLKSLLTNKR VKSPQVKHSS FLPEENTNAA SHNQFPPINK PSPVSGNDIK
QTLVIVDNPV TNTISTTHQT RVENFGRYQV EGVLGKGAMG IVYQGVDPKI NRHVAIKTLQ
LSDDIDSPEF GEAKARFFRE AQTAGGLSHA NIVTIYDVGE DNHLGYIAMD LLTGAPLSLF
TQADKILPTP LVYQLLIQIT DALEYAHNQN VVHRDIKPAN IIYDDDLLKV TVTDFGIAYV
SDNSNTRTGI IMGSPYYMSP EQILGLKVDG RSDIFSLGVT FYQLLCGHLP FEGESIATVA
YQITKAKAIA VNQRNTNLPT SAMRICSKAM HKDIDKRFQS MSEFKLALTN ALKRDFKITA
N
|
|---|
| |