| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3662 |
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| Symbol | pilT |
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| ID | 3522190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3806379 |
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| End bp | 3807422 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286110 |
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| Product | twitching motility protein PilT |
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| Protein accession | YP_270330 |
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| Protein GI | 71281718 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.69581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA CCGAACTACT CGCATTTAGT GTGGAGCATA ACGCATCAGA TTTACATTTA
TCAACAGGTA CACCGCCCGC TATTCGTGTT GATGGTGACG TACGTAAACT GAATATTCCA
GCCTTTGATG GCAAAGATGT TAATGCGTTA GTTTATGACA TTATGAATGA TCGTCAACGT
AAAGAATATG AAGAAAACTT GGAAGTCGAT TTCTCATTTG AAGTACCAAA CTTAGCACGT
TTCAGGGTTA ATGCTTTTAA TCAAAATAGA GGCCCCGCAG CCGTATTTCG TACAATCCCG
AGTAAAATCC TTTCACTTGA TGATTTAGGG TGTCCTGAAA TATTTCGTGA AATATCAGAT
ACACCACGTG GCTTGGTGTT AGTTACTGGG CCTACCGGCT CAGGAAAATC AACCACGTTA
GCTGCGATGG TTGATTATAT TAATGATCAT AAACACGATC ATATTCTCAC CATTGAAGAT
CCAATAGAAT TTGTACATGA AAATAAAAAG TGTCTTATTA ATCAGCGTGA AGTTCACCGC
GATACGTTAA GCTTTTCAGC TGCATTACGT TCAGCCTTGC GTGAAGATCC AGATGTGATC
TTAGTCGGTG AAATGCGAGA TTTAGAAACG ATTCGCTTAG CTATGACAGC AGCAGAAACA
GGCCATTTAG TCTTTGGCAC CTTGCATACA ACCTCAGCAC CAAAAACTAT TGACCGTATT
ATTGATGTAT TTCCAGGCGA AGAAAAATCT ATGGTTCGCT CAATGCTGTC AGAGTCACTT
CGCGCGGTAA TTTCACAATG CCTAATTAAA AGAGTCGGTG GTGGTCGTGT TGCTGCTCAT
GAAATTATGA TTGGGGTTCC CGCTATTCGA AACCTTATTC GTGAAGATAA AATTGCCCAA
ATGTACTCAG CGATTCAAAC AGGTATGCAA CATGGCATGC AGACTATGGA TCAATGTCTA
CAGGGCCTTG TTAACAGAGG CATGATTACT AAACAAGATG CGATGGAAAA AGCAGTTGAT
AAAAATCAAT TTTCAGGCTT TTAA
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| Protein sequence | MDITELLAFS VEHNASDLHL STGTPPAIRV DGDVRKLNIP AFDGKDVNAL VYDIMNDRQR
KEYEENLEVD FSFEVPNLAR FRVNAFNQNR GPAAVFRTIP SKILSLDDLG CPEIFREISD
TPRGLVLVTG PTGSGKSTTL AAMVDYINDH KHDHILTIED PIEFVHENKK CLINQREVHR
DTLSFSAALR SALREDPDVI LVGEMRDLET IRLAMTAAET GHLVFGTLHT TSAPKTIDRI
IDVFPGEEKS MVRSMLSESL RAVISQCLIK RVGGGRVAAH EIMIGVPAIR NLIREDKIAQ
MYSAIQTGMQ HGMQTMDQCL QGLVNRGMIT KQDAMEKAVD KNQFSGF
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